DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycD and XB997834

DIOPT Version :10

Sequence 1:NP_523355.2 Gene:CycD / 32551 FlyBaseID:FBgn0010315 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_017951851.1 Gene:XB997834 / 100487861 XenbaseID:XB-GENE-997835 Length:327 Species:Xenopus tropicalis


Alignment Length:292 Identity:70/292 - (23%)
Similarity:114/292 - (39%) Gaps:46/292 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 PPATDNVNTAIGD--PTL-----YSDRCLENFLKVEEKHHKIPDTYFSIQKDITPPMRKIVAEWM 189
            ||..|..|| .|:  .||     |.:.|......:||..  ||..:.:.|.||.....|.|...|
 Frog    39 PPVQDPWNT-FGNMADTLQTFMDYGETCYMFKKSLEEDF--IPHNFLANQSDINAKCWKDVVITM 100

  Fly   190 MEVCAEENCQEEVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLASKLREPSCRALSVDLLVVY 254
            :..........|.:.||:||::|||:...::...|:::...||.||.|:.|.|...:: ..|.::
 Frog   101 IIAHRAFKLDFETLCLAVNYLERFLACTPLKAANLKVMGGTCLYLACKVMEKSLPKIN-QFLALF 164

  Fly   255 TDNSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLELLMMRLPIGSKNFPDINIGKVRG---HAQA 316
            .::......:...|..||.||.:.|.:.|...|||...:| .:.:|..|...|.:...   .|:.
 Frog   165 CEDGFTAPLMSYLERLVLRRLCFRLGAPTIEYFLEHFSLR-RVSNKECPAAKINRAANALTAARG 228

  Fly   317 FISLAAKEHKFAKFSASTIAASSIAASMN----------------GLKWHLRSGHNLHFLLSLMT 365
            ..:|:..::.|..:..|.:|...:.|:..                |..|....|:        :|
 Frog   229 IAALSMTKYGFPAYPPSLLAQCCLTAADQIFQYDPWNRVHPRDCLGPLWQECMGN--------IT 285

  Fly   366 DLTSVEQAQVRDCMLH--MEDIFKEHSRNLEP 395
            .|.||.:     ...|  |..:|.|...:|.|
 Frog   286 HLVSVNK-----IFFHKIMPGVFPETFPDLVP 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycDNP_523355.2 CYCLIN_SF 144..278 CDD:477360 36/140 (26%)
CYCLIN_CCND_rpt2 283..387 CDD:410220 23/124 (19%)
XB997834XP_017951851.1 Cyclin_N 66..190 CDD:459686 32/126 (25%)
CYCLIN_SF 192..289 CDD:477360 19/105 (18%)

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