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Protein Alignment MSBP and pgrmc1
DIOPT Version :9
Sequence 1: | NP_001162765.1 |
Gene: | MSBP / 32548 |
FlyBaseID: | FBgn0030703 |
Length: | 248 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001007393.1 |
Gene: | pgrmc1 / 492520 |
ZFINID: | ZDB-GENE-041114-91 |
Length: | 179 |
Species: | Danio rerio |
Alignment Length: | 174 |
Identity: | 88/174 - (50%) |
Similarity: | 128/174 - (73%) |
Gaps: | 9/174 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 32 IIREILYSPMNLALLAIICFLVYKIVRDRTEVPS-VGVAKPSEPELPKI-RRDFTVKELRQYDGT 94
|::||..||:|::||.:..||:|||:|. :.|: .| |.|..|||: :||||:.:|::|||.
Zfish 12 ILQEIFTSPLNISLLCLCLFLLYKIIRG--DKPADYG---PVEEPLPKLKKRDFTLADLQEYDGL 71
Fly 95 QPDGRVLVAVNGSVYDVSKGRRFYGPGGPYATFAGRDASRNLATFSV-VSIDKDEYDDLSDLSAV 158
: :.|:|:||||.|:||::|::||||.|||..|||:||||.||||.: ....||.:||||||:|:
Zfish 72 K-NPRILMAVNGKVFDVTRGKKFYGPEGPYGVFAGKDASRGLATFCLEKEALKDTHDDLSDLNAM 135
Fly 159 EMDSVREWEMQFKEKYELVGKLLRKGEEPTNYDDDEDEENVNND 202
:.:|:.|||.||.:||:.:||||:.|||||.|.|||:.::...|
Zfish 136 QQESLSEWETQFTQKYDYIGKLLKPGEEPTEYTDDEEVKDKKKD 179
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
MSBP | NP_001162765.1 |
Cyt-b5 |
82..180 |
CDD:278597 |
53/98 (54%) |
pgrmc1 | NP_001007393.1 |
Cyt-b5 |
59..157 |
CDD:278597 |
53/98 (54%) |
Information from Original Tools:
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