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Protein Alignment MSBP and pgrmc1
DIOPT Version :9
Sequence 1: | NP_001162765.1 |
Gene: | MSBP / 32548 |
FlyBaseID: | FBgn0030703 |
Length: | 248 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001006842.1 |
Gene: | pgrmc1 / 448590 |
XenbaseID: | XB-GENE-6082492 |
Length: | 177 |
Species: | Xenopus tropicalis |
Alignment Length: | 183 |
Identity: | 90/183 - (49%) |
Similarity: | 130/183 - (71%) |
Gaps: | 17/183 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 32 IIREILYSPMNLALLAIICFLVYKIVR-DRTEVPSVGVAKPSEPELPKI-RRDFTVKELRQYDGT 94
|::||..||:|:.||.:..:|:|||:| |:.: ..:.:|.:|||: |||||..||::|||.
Frog 6 ILQEIFTSPLNICLLCLCLYLLYKILRGDKPQ-----TTENNEEQLPKMKRRDFTPAELKEYDGV 65
Fly 95 QPDGRVLVAVNGSVYDVSKGRRFYGPGGPYATFAGRDASRNLATFSVVSID----KDEYDDLSDL 155
| :.|:|:|::|.|:||::|::||||.|||..||||||||.|||| .:| ||.|||||||
Frog 66 Q-NPRILMAISGKVFDVTRGKKFYGPEGPYGVFAGRDASRGLATF---CLDKEALKDTYDDLSDL 126
Fly 156 SAVEMDSVREWEMQFKEKYELVGKLLRKGEEPTNYDDDEDEENVNNDEQERKN 208
:|.:.:::.:||.||..||..|||||:.|||||.|.||||.::.: :.::||
Frog 127 TATQRETLSDWEAQFTFKYHHVGKLLKDGEEPTEYTDDEDAKDTS--DLKKKN 177
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
MSBP | NP_001162765.1 |
Cyt-b5 |
82..180 |
CDD:278597 |
55/101 (54%) |
pgrmc1 | NP_001006842.1 |
Cyt-b5 |
55..118 |
CDD:395121 |
35/66 (53%) |
Information from Original Tools:
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