DRSC/TRiP Functional Genomics Resources

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Protein Alignment MSBP and Nenf

DIOPT Version :9

Sequence 1:NP_001162765.1 Gene:MSBP / 32548 FlyBaseID:FBgn0030703 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001002851.1 Gene:Nenf / 289380 RGDID:1303289 Length:171 Species:Rattus norvegicus


Alignment Length:171 Identity:56/171 - (32%)
Similarity:91/171 - (53%) Gaps:24/171 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LALLAIICFLVYKIVRDRTEVPSV---GVAKPSEPELPKIRRDFTVKELRQYDGTQPDGRVLVAV 104
            ||.||:...||        .|||.   .:.:|:|...|.  |.||.:||.:|.|.:.|..:.:||
  Rat    13 LAALALALALV--------RVPSARAGQMPRPAERGPPV--RLFTEEELARYSGEEEDQPIYLAV 67

  Fly   105 NGSVYDVSKGRRFYGPGGPYATFAGRDASRNLATFSVVSIDKDEYDDLSDLSAVEMDSVRE-WEM 168
            .|.|:||:.|:.|||.|.||...||:|:||.:|..|:...|...  |:|.|:|.|::::.: :..
  Rat    68 KGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPADLTH--DISGLTAKELEALDDIFSK 130

  Fly   169 QFKEKYELVG----KLLRKGEEPTNYD---DDEDEENVNND 202
            .:|.||.:||    ::|.:...| |.|   :|:...::.::
  Rat   131 VYKAKYPIVGYTARRILNEDGSP-NLDFKPEDQPHFDIKDE 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MSBPNP_001162765.1 Cyt-b5 82..180 CDD:278597 38/102 (37%)
NenfNP_001002851.1 Cyt-b5 45..>100 CDD:278597 25/54 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 151..171 4/21 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1110
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100542
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.710

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