DRSC/TRiP Functional Genomics Resources

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Protein Alignment MSBP and PGRMC1

DIOPT Version :9

Sequence 1:NP_001162765.1 Gene:MSBP / 32548 FlyBaseID:FBgn0030703 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_006658.1 Gene:PGRMC1 / 10857 HGNCID:16090 Length:195 Species:Homo sapiens


Alignment Length:208 Identity:105/208 - (50%)
Similarity:132/208 - (63%) Gaps:28/208 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GADPSSAYDKEIGNNLNNDDSSFLGNIIREILYSPMNLALLAIICFLVYKIVRDRTEVPSVGVAK 70
            |||||   |.|            .|.::.||..||:||.||.:..||:|||||......|.....
Human    10 GADPS---DLE------------SGGLLHEIFTSPLNLLLLGLCIFLLYKIVRGDQPAASGDSDD 59

  Fly    71 PSEPELPKI-RRDFTVKELRQYDGTQPDGRVLVAVNGSVYDVSKGRRFYGPGGPYATFAGRDASR 134
            ...|.||:: |||||..|||::||.| |.|:|:|:||.|:||:|||:||||.|||..||||||||
Human    60 DEPPPLPRLKRRDFTPAELRRFDGVQ-DPRILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASR 123

  Fly   135 NLATFSVVSID----KDEYDDLSDLSAVEMDSVREWEMQFKEKYELVGKLLRKGEEPTNYDDDED 195
            .||||   .:|    ||||||||||:|.:.:::.:||.||..||..|||||::|||||.|.|:|:
Human   124 GLATF---CLDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKLLKEGEEPTVYSDEEE 185

  Fly   196 EENVNNDEQERKN 208
            .:    ||..|||
Human   186 PK----DESARKN 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MSBPNP_001162765.1 Cyt-b5 82..180 CDD:278597 60/101 (59%)
PGRMC1NP_006658.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..71 4/19 (21%)
Cyt-b5 74..137 CDD:306642 39/66 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..195 13/26 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149651
Domainoid 1 1.000 89 1.000 Domainoid score I7850
eggNOG 1 0.900 - - E1_KOG1110
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H48457
Inparanoid 1 1.050 183 1.000 Inparanoid score I3974
Isobase 1 0.950 - 0 Normalized mean entropy S1266
OMA 1 1.010 - - QHG48262
OrthoDB 1 1.010 - - D1331617at2759
OrthoFinder 1 1.000 - - FOG0001870
OrthoInspector 1 1.000 - - otm40915
orthoMCL 1 0.900 - - OOG6_100542
Panther 1 1.100 - - O PTHR10281
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R288
SonicParanoid 1 1.000 - - X1226
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1817.750

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