DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gapdh2 and TDH1

DIOPT Version :10

Sequence 1:NP_542445.1 Gene:Gapdh2 / 32545 FlyBaseID:FBgn0001092 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_012483.3 Gene:TDH1 / 853395 SGDID:S000003588 Length:332 Species:Saccharomyces cerevisiae


Alignment Length:329 Identity:220/329 - (66%)
Similarity:263/329 - (79%) Gaps:1/329 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKIGINGFGRIGRLVLRAAID-KGANVVAVNDPFIDVNYMVYLFKFDSTHGRFKGTVAAEGGFL 64
            |.:|.|||||||||||||.|:. |...|||||||||..:|..|:.|:||||||:||||:.:...:
Yeast     1 MIRIAINGFGRIGRLVLRLALQRKDIEVVAVNDPFISNDYAAYMVKYDSTHGRYKGTVSHDDKHI 65

  Fly    65 VVNGQKITVFSERDPANINWASAGAEYIVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFV 129
            :::|.||..:.||||||:.|.|...:..|:|||||..:|.|..|:..|||||:|:|||:.|||||
Yeast    66 IIDGVKIATYQERDPANLPWGSLKIDVAVDSTGVFKELDTAQKHIDAGAKKVVITAPSSSAPMFV 130

  Fly   130 CGVNLDAYKPDMKVVSNASCTTNCLAPLAKVINDNFEIVEGLMTTVHATTATQKTVDGPSGKLWR 194
            .|||...|.||.|:||||||||||||||||||||.|.|.||||||||:.|||||||||||.|.||
Yeast   131 VGVNHTKYTPDKKIVSNASCTTNCLAPLAKVINDAFGIEEGLMTTVHSMTATQKTVDGPSHKDWR 195

  Fly   195 DGRGAAQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGASYDEIKAKV 259
            .||.|:.||||:|||||||||||:|.|.||||||||||||.:||||||||:|.|.|:||:||..|
Yeast   196 GGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVKLEKEATYDQIKKAV 260

  Fly   260 QEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDL 324
            :.||.||:||:||||::.|||:|||.|||:|:|||.|||.|:.||||||||||||:|||.||:||
Yeast   261 KAAAEGPMKGVLGYTEDAVVSSDFLGDTHASIFDASAGIQLSPKFVKLISWYDNEYGYSARVVDL 325

  Fly   325 IKYM 328
            |:|:
Yeast   326 IEYV 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gapdh2NP_542445.1 PLN02272 <2..328 CDD:177912 218/326 (67%)
TDH1NP_012483.3 GapA 2..332 CDD:439827 219/328 (67%)

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