DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gapdh2 and GAPCP-1

DIOPT Version :9

Sequence 1:NP_001259584.1 Gene:Gapdh2 / 32545 FlyBaseID:FBgn0001092 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_178071.1 Gene:GAPCP-1 / 844291 AraportID:AT1G79530 Length:422 Species:Arabidopsis thaliana


Alignment Length:329 Identity:234/329 - (71%)
Similarity:279/329 - (84%) Gaps:2/329 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKIGINGFGRIGRLVLRAAIDK-GANVVAVNDPFIDVNYMVYLFKFDSTHGRFKGTV-AAEGGFL 64
            :|:||||||||||||||.|..: ...||||||||||..||.|:.|:|||||.|||:: ..:...|
plant    87 TKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMLKYDSTHGNFKGSINVIDDSTL 151

  Fly    65 VVNGQKITVFSERDPANINWASAGAEYIVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFV 129
            .:||:|:.|.|:|||:.|.||..||:|:|||:|||||:.||::||||||||||||||||||||||
plant   152 EINGKKVNVVSKRDPSEIPWADLGADYVVESSGVFTTLSKAASHLKGGAKKVIISAPSADAPMFV 216

  Fly   130 CGVNLDAYKPDMKVVSNASCTTNCLAPLAKVINDNFEIVEGLMTTVHATTATQKTVDGPSGKLWR 194
            .|||...|:|:|.:|||||||||||||||||:::.|.|:|||||||||||||||||||||.|.||
plant   217 VGVNEHTYQPNMDIVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWR 281

  Fly   195 DGRGAAQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGASYDEIKAKV 259
            .||||:|||||:|||||||||||:|.||||||||||||||.||||||||.||.|||||:::||.:
plant   282 GGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTSNVSVVDLTCRLEKGASYEDVKAAI 346

  Fly   260 QEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDL 324
            :.|:.||||||||||||:|||.||:.|:.||:|||.|||.|:..||||:||||||:||||||:||
plant   347 KHASEGPLKGILGYTDEDVVSNDFVGDSRSSIFDANAGIGLSKSFVKLVSWYDNEWGYSNRVLDL 411

  Fly   325 IKYM 328
            |::|
plant   412 IEHM 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gapdh2NP_001259584.1 PLN02272 <2..328 CDD:177912 233/327 (71%)
GAPCP-1NP_178071.1 PLN02272 1..422 CDD:177912 234/329 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 246 1.000 Domainoid score I544
eggNOG 1 0.900 - - E1_COG0057
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 479 1.000 Inparanoid score I339
OMA 1 1.010 - - QHG53863
OrthoDB 1 1.010 - - D945145at2759
OrthoFinder 1 1.000 - - FOG0000254
OrthoInspector 1 1.000 - - mtm1061
orthoMCL 1 0.900 - - OOG6_100218
Panther 1 1.100 - - O PTHR10836
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X175
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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