DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gapdh2 and GAPC2

DIOPT Version :10

Sequence 1:NP_542445.1 Gene:Gapdh2 / 32545 FlyBaseID:FBgn0001092 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_172801.1 Gene:GAPC2 / 837904 AraportID:AT1G13440 Length:338 Species:Arabidopsis thaliana


Alignment Length:329 Identity:222/329 - (67%)
Similarity:269/329 - (81%) Gaps:3/329 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KIGINGFGRIGRLVLRAAIDK-GANVVAVNDPFIDVNYMVYLFKFDSTHGRFK-GTVAAEGGFLV 65
            :|||||||||||||.|..:.: ...:||||||||...||.|:||:||.||::| ..:..:....:
plant     7 RIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHHELKVKDDKTL 71

  Fly    66 VNGQK-ITVFSERDPANINWASAGAEYIVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFV 129
            :.|:| :|||..|:|.:|.|..|||:::||||||||..|||:.|||||||||:|||||.||||||
plant    72 LFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFV 136

  Fly   130 CGVNLDAYKPDMKVVSNASCTTNCLAPLAKVINDNFEIVEGLMTTVHATTATQKTVDGPSGKLWR 194
            .|||...||.|:.:||||||||||||||||||||.|.||||||||||:.|||||||||||.|.||
plant   137 VGVNEHEYKSDLDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWR 201

  Fly   195 DGRGAAQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGASYDEIKAKV 259
            .||.|:.||||:|||||||||||:|:||||||||:|||||.:||||||||||.|.|:|||||..:
plant   202 GGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAI 266

  Fly   260 QEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDL 324
            :|.:.|.:|||||||:::||||||:.|..||:|||||||:|:||||||:||||||:|||:||:||
plant   267 KEESEGKMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDL 331

  Fly   325 IKYM 328
            |.:|
plant   332 IVHM 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gapdh2NP_542445.1 PLN02272 <2..328 CDD:177912 221/327 (68%)
GAPC2NP_172801.1 PLN02358 1..338 CDD:165999 222/329 (67%)

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