DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gapdh2 and PNMA8B

DIOPT Version :10

Sequence 1:NP_542445.1 Gene:Gapdh2 / 32545 FlyBaseID:FBgn0001092 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_065760.1 Gene:PNMA8B / 57469 HGNCID:29206 Length:635 Species:Homo sapiens


Alignment Length:199 Identity:41/199 - (20%)
Similarity:70/199 - (35%) Gaps:52/199 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPALN-GKLTG------------MAFRV 232
            |||     ..|..|.||.:|.....|...:.:::|.||..:: |.|:|            .|.|.
Human   174 TQK-----GKKRSRGGRPSAPARSEAEDSSDESLGIVIEEIDQGDLSGEEDQSALYATLQAAARE 233

  Fly   233 ----------------PTPNVSVVDLTVRLGK------GASYDEIKAKVQEAANG-----PLKGI 270
                            |...:::|.:|.:..|      .|..:.|:...:|..||     .|..:
Human   234 LVRQWAPCNSEGEEDGPREFLALVTVTDKSKKEEAEKEPAGAESIRLNTKEDKNGVPDLVALLAV 298

  Fly   271 LGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNR-------VIDLIKYM 328
            ....|||.|.:|..........|.:.....|.:||.::::.|....::..       ||:.:.:.
Human   299 RDTPDEEPVDSDTSESDSQESGDQETEELDNPEFVAIVAYTDPSDPWAREEMLKIASVIESLGWS 363

  Fly   329 QSKD 332
            ..||
Human   364 DEKD 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gapdh2NP_542445.1 PLN02272 <2..328 CDD:177912 39/193 (20%)
PNMA8BNP_065760.1 PNMA 1..>143 CDD:464357
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 115..202 9/32 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..332 15/71 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 492..635
Blue background indicates that the domain is not in the aligned region.

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