DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gapdh2 and Pnmal2

DIOPT Version :9

Sequence 1:NP_001259584.1 Gene:Gapdh2 / 32545 FlyBaseID:FBgn0001092 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001093106.1 Gene:Pnmal2 / 434128 MGIID:3645856 Length:661 Species:Mus musculus


Alignment Length:82 Identity:18/82 - (21%)
Similarity:36/82 - (43%) Gaps:15/82 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 KAKVQEAANGPLKGILGYTDE-----EVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEF 315
            :.||:||.......:|...:|     |.:||  |::..:.....|:|:.|      |..|  ...
Mouse   406 RVKVEEAGRQVDAMVLRKAEEDGNLLECIST--LAEAENCPKGKKSGLGL------LRGW--TAE 460

  Fly   316 GYSNRVIDLIKYMQSKD 332
            |:...:::|:..:.::|
Mouse   461 GHQGGLLELVALLAAQD 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gapdh2NP_001259584.1 PLN02272 <2..328 CDD:177912 17/76 (22%)
Pnmal2NP_001093106.1 PNMA 1..>114 CDD:373368
DNA_pol_phi <500..551 CDD:368199
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0057
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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