DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gapdh2 and GAPDHS

DIOPT Version :9

Sequence 1:NP_001259584.1 Gene:Gapdh2 / 32545 FlyBaseID:FBgn0001092 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_055179.1 Gene:GAPDHS / 26330 HGNCID:24864 Length:408 Species:Homo sapiens


Alignment Length:330 Identity:231/330 - (70%)
Similarity:272/330 - (82%) Gaps:1/330 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGINGFGRIGRLVLRAAIDKGANVVAVNDPFIDVNYMVYLFKFDSTHGRFKGTVAAEGGFLVVNG 68
            :|||||||||||||||.::||..||||||||||..||||:||:||||||:||:|....|.|||:.
Human    78 VGINGFGRIGRLVLRACMEKGVKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVDN 142

  Fly    69 QKITVFSERDPANINWASAGAEYIVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVCGVN 133
            .:|:|:..::|..|.|.:.|:.|:||||||:.:|..||.|:..||::|:|||||.||||||.|||
Human   143 HEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVN 207

  Fly   134 LDAYKP-DMKVVSNASCTTNCLAPLAKVINDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGR 197
            .:.|.| .|.:||||||||||||||||||::.|.||||||||||:.|||||||||||.|.|||||
Human   208 ENDYNPGSMNIVSNASCTTNCLAPLAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGR 272

  Fly   198 GAAQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGASYDEIKAKVQEA 262
            ||.||||||||||||||.||||.|.|||||||||||||:|||||||.||.:.|.|..||..|:.|
Human   273 GAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAVKAA 337

  Fly   263 ANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDLIKY 327
            |.||:.|||.||::||||||||.|||||:|||||||:|||.|||||||||||:|||:||:||::|
Human   338 AKGPMAGILAYTEDEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDLLRY 402

  Fly   328 MQSKD 332
            |.|:|
Human   403 MFSRD 407

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Gapdh2NP_001259584.1 PLN02272 <2..328 CDD:177912 227/324 (70%)
GAPDHSNP_055179.1 Testis-specific N-terminal extension 1..73
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..68
GapA 78..408 CDD:223135 231/330 (70%)
Gp_dh_N 78..224 CDD:278473 87/145 (60%)
Glyceraldehyde 3-phosphate binding. /evidence=ECO:0000250 223..225 1/1 (100%)
Gp_dh_C 229..386 CDD:280894 122/156 (78%)