DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gapdh2 and tdh1

DIOPT Version :10

Sequence 1:NP_542445.1 Gene:Gapdh2 / 32545 FlyBaseID:FBgn0001092 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_596154.1 Gene:tdh1 / 2540547 PomBaseID:SPBC32F12.11 Length:336 Species:Schizosaccharomyces pombe


Alignment Length:331 Identity:232/331 - (70%)
Similarity:279/331 - (84%) Gaps:1/331 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KIGINGFGRIGRLVLR-AAIDKGANVVAVNDPFIDVNYMVYLFKFDSTHGRFKGTVAAEGGFLVV 66
            |:||||||||||:||| |.:.|...|||:||||||:.||.|:||:|||||||.|:|..:.|.||:
pombe     5 KVGINGFGRIGRIVLRNALVAKTIQVVAINDPFIDLEYMAYMFKYDSTHGRFDGSVEIKDGKLVI 69

  Fly    67 NGQKITVFSERDPANINWASAGAEYIVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVCG 131
            :|..|.|.:|||||:|.|:::||:|::||||||||.:.||.|||||||:|||||||.||||:|.|
pombe    70 DGNAIDVHNERDPADIKWSTSGADYVIESTGVFTTQETASAHLKGGAKRVIISAPSKDAPMYVVG 134

  Fly   132 VNLDAYKPDMKVVSNASCTTNCLAPLAKVINDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDG 196
            ||.:.:.|..||:|||||||||||||||||||.|.|.|||||||||||||||||||||.|.||.|
pombe   135 VNEEKFNPSEKVISNASCTTNCLAPLAKVINDTFGIEEGLMTTVHATTATQKTVDGPSKKDWRGG 199

  Fly   197 RGAAQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGASYDEIKAKVQE 261
            |||:.||||:|||||||||||||||||||||||||||||:||||||||:|.|..:|::|||.::.
pombe   200 RGASANIIPSSTGAAKAVGKVIPALNGKLTGMAFRVPTPDVSVVDLTVKLAKPTNYEDIKAAIKA 264

  Fly   262 AANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDLIK 326
            |:.||:||:||||::.||||||..|.|||:|||.|||.|:.:||||:||||||:|||.||:||:.
pombe   265 ASEGPMKGVLGYTEDAVVSTDFCGDNHSSIFDASAGIQLSPQFVKLVSWYDNEWGYSRRVVDLVA 329

  Fly   327 YMQSKD 332
            |..:||
pombe   330 YTAAKD 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gapdh2NP_542445.1 PLN02272 <2..328 CDD:177912 229/325 (70%)
tdh1NP_596154.1 PLN02272 <5..332 CDD:177912 230/326 (71%)

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