DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gapdh2 and LOC1278999

DIOPT Version :10

Sequence 1:NP_542445.1 Gene:Gapdh2 / 32545 FlyBaseID:FBgn0001092 Length:332 Species:Drosophila melanogaster
Sequence 2:XP_318655.2 Gene:LOC1278999 / 1278999 VectorBaseID:AGAMI1_010649 Length:332 Species:Anopheles gambiae


Alignment Length:332 Identity:283/332 - (85%)
Similarity:307/332 - (92%) Gaps:0/332 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKIGINGFGRIGRLVLRAAIDKGANVVAVNDPFIDVNYMVYLFKFDSTHGRFKGTVAAEGGFLV 65
            |||||||||||||||||||||.|||:|||:|||||.|:|||||||:|||||||||.|:|:.|.||
Mosquito     1 MSKIGINGFGRIGRLVLRAAITKGASVVAINDPFIGVDYMVYLFKYDSTHGRFKGEVSAQDGCLV 65

  Fly    66 VNGQKITVFSERDPANINWASAGAEYIVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVC 130
            ||||||.||.||||..|.|..|||||:|||||||||.:|||.||:|||||||||||||||||||.
Mosquito    66 VNGQKIAVFQERDPKAIPWGKAGAEYVVESTGVFTTTEKASAHLEGGAKKVIISAPSADAPMFVV 130

  Fly   131 GVNLDAYKPDMKVVSNASCTTNCLAPLAKVINDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRD 195
            ||||:||:|.|||||||||||||||||||||||||.|:|||||||||||||||||||||||||||
Mosquito   131 GVNLEAYEPSMKVVSNASCTTNCLAPLAKVINDNFGILEGLMTTVHATTATQKTVDGPSGKLWRD 195

  Fly   196 GRGAAQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGASYDEIKAKVQ 260
            |||||||||||:|||||||||||||||||||||||||||||||||||||||.|.|:||:||.||:
Mosquito   196 GRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLSKPATYDQIKQKVK 260

  Fly   261 EAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDLI 325
            ||||||:||||.||:||||||||:.|.|||:|||||||.|:|.|||||||||||:||||||:|||
Mosquito   261 EAANGPMKGILDYTEEEVVSTDFVGDCHSSIFDAKAGIQLSDTFVKLISWYDNEYGYSNRVVDLI 325

  Fly   326 KYMQSKD 332
            ||||:||
Mosquito   326 KYMQTKD 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gapdh2NP_542445.1 PLN02272 <2..328 CDD:177912 277/325 (85%)
LOC1278999XP_318655.2 PLN02272 <2..328 CDD:177912 277/325 (85%)

Return to query results.
Submit another query.