DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta13F and STE4

DIOPT Version :9

Sequence 1:NP_001303567.1 Gene:Gbeta13F / 32544 FlyBaseID:FBgn0001105 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_014855.3 Gene:STE4 / 854387 SGDID:S000005738 Length:423 Species:Saccharomyces cerevisiae


Alignment Length:386 Identity:136/386 - (35%)
Similarity:206/386 - (53%) Gaps:50/386 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPI--GRIQMRTRRTLRGHLAKIYAMHWG 64
            |::::.|||::.|...|..|:....|.||.|.|..:..:  .:|.::....|:||..||....|.
Yeast    37 NKIEAARQESKQLHAQINKAKHKIQDASLFQMANKVTSLTKNKINLKPNIVLKGHNNKISDFRWS 101

  Fly    65 NDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTR 129
            .||:.::||||||.:::|||.:..|.:||||.|.||::||.:||.:.||..||:|.|:||.: ::
Yeast   102 RDSKRILSASQDGFMLIWDSASGLKQNAIPLDSQWVLSCAISPSSTLVASAGLNNNCTIYRV-SK 165

  Fly   130 EGNV--RVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSL 192
            |..|  .|:....||..|:|...|.|:..|:|:||||:|.||||....:|..:..|.|||:||::
Yeast   166 ENRVAQNVASIFKGHTCYISDIEFTDNAHILTASGDMTCALWDIPKAKRVREYSDHLGDVLALAI 230

  Fly   193 APQ------CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCR 251
            ..:      ..||.|...|....:||.|.....|:|..::|||||:.||.:|.:...|||:....
Yeast   231 PEEPNSENSSNTFASCGSDGYTYIWDSRSPSAVQSFYVNDSDINALRFFKDGMSIVAGSDNGAIN 295

  Fly   252 LFDIRADQELAMYS-------------------------------------HDNIICGITSVAFS 279
            ::|:|:|..:|.:|                                     .||  .|:.|:.||
Yeast   296 MYDLRSDCSIATFSLFRGYEERTPTPTYMAANMEYNTAQSPQTLKSTSSSYLDN--QGVVSLDFS 358

  Fly   280 KSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGMAVATGSWDSFLRVWN 340
            .||||:.:.|.|..|.|||.:|.|..|.|.||..||:.:..:.:|:||.||||||.:::|:
Yeast   359 ASGRLMYSCYTDIGCVVWDVLKGEIVGKLEGHGGRVTGVRSSPDGLAVCTGSWDSTMKIWS 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta13FNP_001303567.1 WD40 48..340 CDD:238121 122/336 (36%)
WD40 repeat 58..95 CDD:293791 16/36 (44%)
WD40 repeat 101..141 CDD:293791 15/41 (37%)
WD40 repeat 146..181 CDD:293791 15/34 (44%)
WD40 repeat 188..223 CDD:293791 10/40 (25%)
WD40 repeat 229..265 CDD:293791 13/35 (37%)
WD40 repeat 273..309 CDD:293791 16/35 (46%)
WD40 repeat 315..339 CDD:293791 10/23 (43%)
STE4NP_014855.3 WD40 87..419 CDD:238121 122/334 (37%)
WD40 repeat 95..132 CDD:293791 16/36 (44%)
WD40 repeat 138..179 CDD:293791 15/41 (37%)
WD40 repeat 184..218 CDD:293791 15/33 (45%)
WD40 repeat 226..266 CDD:293791 10/39 (26%)
WD40 repeat 273..329 CDD:293791 14/55 (25%)
WD40 repeat 352..388 CDD:293791 16/35 (46%)
WD40 repeat 394..418 CDD:293791 10/23 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346074
Domainoid 1 1.000 47 1.000 Domainoid score I3018
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 238 1.000 Inparanoid score I698
Isobase 1 0.950 - 0 Normalized mean entropy S419
OMA 1 1.010 - - QHG54867
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 1 1.000 - - otm46827
orthoMCL 1 0.900 - - OOG6_101247
Panther 1 1.100 - - LDO PTHR19850
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R475
SonicParanoid 1 1.000 - - X182
TreeFam 00.000 Not matched by this tool.
1413.780

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