DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta13F and gnb4

DIOPT Version :10

Sequence 1:NP_525090.1 Gene:Gbeta13F / 32544 FlyBaseID:FBgn0001105 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001016952.1 Gene:gnb4 / 549706 XenbaseID:XB-GENE-970638 Length:340 Species:Xenopus tropicalis


Alignment Length:340 Identity:285/340 - (83%)
Similarity:316/340 - (92%) Gaps:0/340 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGN 65
            |:||:.||||||.|:|.|||||||..||:|:|...||:.:||||||||||||||||||||||||:
 Frog     1 MSELEQLRQEAEQLRNQIRDARKACSDTTLVQITASLDSVGRIQMRTRRTLRGHLAKIYAMHWGS 65

  Fly    66 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTRE 130
            |||.|||||||||||:|||:||||:|||||||||||||||||||:|||||||||:||||||||||
 Frog    66 DSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE 130

  Fly   131 GNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQ 195
            ||||||||||||.||||||||||||:|||||||.:|.|||||||.|.|:|.|||||||:|||:|.
 Frog   131 GNVRVSRELPGHTGYLSCCRFLDDNEIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLSPD 195

  Fly   196 CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQE 260
            .:||||||||||:||||||:|:|:|:|.||.||||||.|||||.|||||||||||||||:|||||
 Frog   196 MRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVCFFPNGHAFATGSDDATCRLFDLRADQE 260

  Fly   261 LAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGM 325
            |.|||||||||||||||||||||||||||||||||||||:|.||:|:||||||||||||||::||
 Frog   261 LMMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGERAGVLAGHDNRVSCLGVTDDGM 325

  Fly   326 AVATGSWDSFLRVWN 340
            ||||||||||||:||
 Frog   326 AVATGSWDSFLRIWN 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta13FNP_525090.1 WD40 48..340 CDD:238121 252/291 (87%)
WD40 repeat 58..95 CDD:293791 31/36 (86%)
WD40 repeat 101..141 CDD:293791 37/39 (95%)
WD40 repeat 146..181 CDD:293791 27/34 (79%)
WD40 repeat 188..223 CDD:293791 24/34 (71%)
WD40 repeat 229..265 CDD:293791 31/35 (89%)
WD40 repeat 273..309 CDD:293791 31/35 (89%)
WD40 repeat 315..339 CDD:293791 21/23 (91%)
gnb4NP_001016952.1 WD40 48..340 CDD:238121 252/291 (87%)
WD40 repeat 58..95 CDD:293791 31/36 (86%)
WD40 repeat 101..141 CDD:293791 37/39 (95%)
WD40 repeat 146..181 CDD:293791 27/34 (79%)
WD40 repeat 188..223 CDD:293791 24/34 (71%)
WD40 repeat 229..265 CDD:293791 31/35 (89%)
WD40 repeat 273..309 CDD:293791 31/35 (89%)
WD40 repeat 315..339 CDD:293791 21/23 (91%)

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