DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta13F and gnb3

DIOPT Version :10

Sequence 1:NP_525090.1 Gene:Gbeta13F / 32544 FlyBaseID:FBgn0001105 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001011107.1 Gene:gnb3 / 496520 XenbaseID:XB-GENE-956713 Length:340 Species:Xenopus tropicalis


Alignment Length:340 Identity:260/340 - (76%)
Similarity:298/340 - (87%) Gaps:0/340 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGN 65
            |.||:.||||||:||..|.:|||...||:|.|....:|.:||||:||||||||||||||||||..
 Frog     1 MGELEQLRQEAEALKKQIAEARKQCADTTLEQTTGGMEVVGRIQLRTRRTLRGHLAKIYAMHWST 65

  Fly    66 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTRE 130
            |:|.||||||||||||||::||||||||||||||||||||||||::|||||||||||||||||||
 Frog    66 DARLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKTRE 130

  Fly   131 GNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQ 195
            |||||||||..|.||||||||||||||||||||.:|.|||||||.|.|.|.|||||.|:|:::|.
 Frog   131 GNVRVSRELAAHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQKTVFTGHTGDCMSLAVSPD 195

  Fly   196 CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQE 260
            ...|:||||||||||||:|:|.|:|||.||||||||:.|||:|||..|||||||||:||:|||||
 Frog   196 FNLFISGACDASAKLWDVRQGECRQTFTGHESDINAICFFPSGQAICTGSDDATCRMFDLRADQE 260

  Fly   261 LAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGM 325
            :::||.|:||||||||:||.|||||.|||||||||:||::|.||.|:|:||||||||||||.:||
 Frog   261 ISVYSQDSIICGITSVSFSLSGRLLFAGYDDFNCNIWDSLKRERVGVLSGHDNRVSCLGVTSDGM 325

  Fly   326 AVATGSWDSFLRVWN 340
            |||||||||||::||
 Frog   326 AVATGSWDSFLKIWN 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta13FNP_525090.1 WD40 48..340 CDD:238121 232/291 (80%)
WD40 repeat 58..95 CDD:293791 30/36 (83%)
WD40 repeat 101..141 CDD:293791 37/39 (95%)
WD40 repeat 146..181 CDD:293791 28/34 (82%)
WD40 repeat 188..223 CDD:293791 21/34 (62%)
WD40 repeat 229..265 CDD:293791 25/35 (71%)
WD40 repeat 273..309 CDD:293791 26/35 (74%)
WD40 repeat 315..339 CDD:293791 20/23 (87%)
gnb3NP_001011107.1 WD40 48..340 CDD:238121 232/291 (80%)
WD40 repeat 58..95 CDD:293791 30/36 (83%)
WD40 repeat 101..141 CDD:293791 37/39 (95%)
WD40 repeat 146..181 CDD:293791 28/34 (82%)
WD40 repeat 188..223 CDD:293791 21/34 (62%)
WD40 repeat 229..265 CDD:293791 25/35 (71%)
WD40 repeat 273..309 CDD:293791 26/35 (74%)
WD40 repeat 315..339 CDD:293791 20/23 (87%)

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