DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta13F and gnb4b

DIOPT Version :9

Sequence 1:NP_001303567.1 Gene:Gbeta13F / 32544 FlyBaseID:FBgn0001105 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_021335278.1 Gene:gnb4b / 492811 ZFINID:ZDB-GENE-041114-167 Length:340 Species:Danio rerio


Alignment Length:340 Identity:278/340 - (81%)
Similarity:311/340 - (91%) Gaps:0/340 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGN 65
            |:||:.|||||:.|:|.|||||||..|::|.|...||:.:||||||||||||||||||||||||:
Zfish     1 MSELEQLRQEADQLRNQIRDARKACSDSTLSQMTASLDSVGRIQMRTRRTLRGHLAKIYAMHWGS 65

  Fly    66 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTRE 130
            |||.|||||||||||:||.:||||:|||||||||||||||||||:|||||||||:||.|:|||||
Zfish    66 DSRLLVSASQDGKLIIWDGYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSTYSLKTRE 130

  Fly   131 GNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQ 195
            |||||:|||.||.||||||||||||||:|||||.:|.|||||||.|.|||.|||||||:||::|.
Zfish   131 GNVRVNRELAGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTTSFTGHTGDVMSLSVSPD 195

  Fly   196 CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQE 260
            .||||||||||||||||||:|:|:|:|.||.||||||.|||||.||.||||||||||||:|||||
Zfish   196 SKTFVSGACDASAKLWDIRDGMCRQSFTGHVSDINAVCFFPNGNAFTTGSDDATCRLFDLRADQE 260

  Fly   261 LAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGM 325
            |.||:||||||||||||||||||||||||||||||||||:|.||:|:||||||||||||||::||
Zfish   261 LMMYTHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGERTGVLAGHDNRVSCLGVTDDGM 325

  Fly   326 AVATGSWDSFLRVWN 340
            ||||||||||||:||
Zfish   326 AVATGSWDSFLRIWN 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta13FNP_001303567.1 WD40 48..340 CDD:238121 247/291 (85%)
WD40 repeat 58..95 CDD:293791 30/36 (83%)
WD40 repeat 101..141 CDD:293791 34/39 (87%)
WD40 repeat 146..181 CDD:293791 28/34 (82%)
WD40 repeat 188..223 CDD:293791 25/34 (74%)
WD40 repeat 229..265 CDD:293791 30/35 (86%)
WD40 repeat 273..309 CDD:293791 31/35 (89%)
WD40 repeat 315..339 CDD:293791 21/23 (91%)
gnb4bXP_021335278.1 WD40 48..340 CDD:238121 247/291 (85%)
WD40 repeat 58..95 CDD:293791 30/36 (83%)
WD40 repeat 101..141 CDD:293791 34/39 (87%)
WD40 repeat 146..181 CDD:293791 28/34 (82%)
WD40 repeat 188..223 CDD:293791 25/34 (74%)
WD40 repeat 229..265 CDD:293791 30/35 (86%)
WD40 repeat 273..309 CDD:293791 31/35 (89%)
WD40 repeat 315..339 CDD:293791 21/23 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594725
Domainoid 1 1.000 105 1.000 Domainoid score I6580
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 612 1.000 Inparanoid score I878
OMA 1 1.010 - - QHG54867
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 1 1.000 - - otm25277
orthoMCL 1 0.900 - - OOG6_101247
Panther 1 1.100 - - O PTHR19850
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X182
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.910

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