DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta13F and gnb3a

DIOPT Version :9

Sequence 1:NP_001303567.1 Gene:Gbeta13F / 32544 FlyBaseID:FBgn0001105 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001002437.1 Gene:gnb3a / 436710 ZFINID:ZDB-GENE-040718-134 Length:340 Species:Danio rerio


Alignment Length:340 Identity:232/340 - (68%)
Similarity:282/340 - (82%) Gaps:0/340 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGN 65
            |.|::.||:|||.||:.|..|||...|.:|.........:||:|::||:|||||||||||||||.
Zfish     1 MGEMEQLRKEAEKLKDDITAARKTVQDLTLQDHVAGTAVVGRVQLKTRKTLRGHLAKIYAMHWGT 65

  Fly    66 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTRE 130
            ||:..||||||||||||||:||||||||||:|||||||:|||||:.||||||||||||||||.::
Zfish    66 DSKLCVSASQDGKLIVWDSYTTNKVHAIPLKSSWVMTCSYAPSGNMVACGGLDNMCSIYNLKAKD 130

  Fly   131 GNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQ 195
            |||:|.|||..|.|||||||||.|::|:|||||.:|.|||||||.|.|.|.||.||.|:|:::|.
Zfish   131 GNVKVMRELAAHTGYLSCCRFLSDSEIITSSGDCTCVLWDIETGSQKTVFAGHLGDCMSLAVSPD 195

  Fly   196 CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQE 260
            ..||:|||||.:|||||||||.|:|||.||||||||:.|||||.|..||||||:|:|:|:|:|||
Zfish   196 FNTFISGACDFTAKLWDIREGQCRQTFGGHESDINAIGFFPNGNAVITGSDDASCKLYDLRSDQE 260

  Fly   261 LAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGM 325
            |..|...:|:||:||:|.|.||||:||||||||||:||::|:||.|:|:||||||||:|||.:||
Zfish   261 LITYQDSSIMCGVTSIAPSLSGRLILAGYDDFNCNIWDSLKSERVGVLSGHDNRVSCIGVTPDGM 325

  Fly   326 AVATGSWDSFLRVWN 340
            |..||||||||::||
Zfish   326 ACCTGSWDSFLKIWN 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta13FNP_001303567.1 WD40 48..340 CDD:238121 211/291 (73%)
WD40 repeat 58..95 CDD:293791 31/36 (86%)
WD40 repeat 101..141 CDD:293791 31/39 (79%)
WD40 repeat 146..181 CDD:293791 24/34 (71%)
WD40 repeat 188..223 CDD:293791 22/34 (65%)
WD40 repeat 229..265 CDD:293791 23/35 (66%)
WD40 repeat 273..309 CDD:293791 24/35 (69%)
WD40 repeat 315..339 CDD:293791 17/23 (74%)
gnb3aNP_001002437.1 WD40 48..340 CDD:238121 211/291 (73%)
WD40 repeat 58..95 CDD:293791 31/36 (86%)
WD40 repeat 101..141 CDD:293791 31/39 (79%)
WD40 repeat 146..181 CDD:293791 24/34 (71%)
WD40 repeat 188..223 CDD:293791 22/34 (65%)
WD40 repeat 229..265 CDD:293791 23/35 (66%)
WD40 repeat 273..309 CDD:293791 24/35 (69%)
WD40 repeat 315..339 CDD:293791 17/23 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54867
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19850
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X182
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.930

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