DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta13F and gnb1a

DIOPT Version :10

Sequence 1:NP_525090.1 Gene:Gbeta13F / 32544 FlyBaseID:FBgn0001105 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_997774.1 Gene:gnb1a / 322104 ZFINID:ZDB-GENE-030131-823 Length:340 Species:Danio rerio


Alignment Length:340 Identity:285/340 - (83%)
Similarity:313/340 - (92%) Gaps:0/340 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGN 65
            |:|||.||||||.|||.|||||||..|.:|.|...:::|:||||||||||||||||||||||||.
Zfish     1 MSELDQLRQEAEQLKNQIRDARKACADATLSQITANIDPVGRIQMRTRRTLRGHLAKIYAMHWGT 65

  Fly    66 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTRE 130
            |||.|||||||||||:|||:||||||||||||||||||||||||:|||||||||:||||||||||
Zfish    66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE 130

  Fly   131 GNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQ 195
            |||||||||.||.||||||||||||||||||||.:|.|||||||.|.|:|.|||||||:|||||.
Zfish   131 GNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPD 195

  Fly   196 CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQE 260
            .:.||||||||||||||:|||:|:|||.||||||||:.|||||.|||||||||||||||:|||||
Zfish   196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260

  Fly   261 LAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGM 325
            |.:|||||||||||||||||||||||||||||||||||.:||:|:|:||||||||||||||::||
Zfish   261 LMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGM 325

  Fly   326 AVATGSWDSFLRVWN 340
            |||||||||||::||
Zfish   326 AVATGSWDSFLKIWN 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta13FNP_525090.1 WD40 48..340 CDD:238121 252/291 (87%)
WD40 repeat 58..95 CDD:293791 32/36 (89%)
WD40 repeat 101..141 CDD:293791 37/39 (95%)
WD40 repeat 146..181 CDD:293791 28/34 (82%)
WD40 repeat 188..223 CDD:293791 26/34 (76%)
WD40 repeat 229..265 CDD:293791 29/35 (83%)
WD40 repeat 273..309 CDD:293791 30/35 (86%)
WD40 repeat 315..339 CDD:293791 20/23 (87%)
gnb1aNP_997774.1 WD40 48..340 CDD:238121 252/291 (87%)
WD 1 53..83 26/29 (90%)
WD40 repeat 58..95 CDD:293791 32/36 (89%)
WD 2 95..125 27/29 (93%)
WD40 repeat 101..141 CDD:293791 37/39 (95%)
WD 3 141..170 24/28 (86%)
WD40 repeat 146..181 CDD:293791 28/34 (82%)
WD 4 182..212 24/29 (83%)
WD40 repeat 188..223 CDD:293791 26/34 (76%)
WD 5 224..254 26/29 (90%)
WD40 repeat 229..265 CDD:293791 29/35 (83%)
WD 6 268..298 29/29 (100%)
WD40 repeat 273..309 CDD:293791 30/35 (86%)
WD 7 310..340 25/29 (86%)
WD40 repeat 315..339 CDD:293791 20/23 (87%)

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