DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gbeta13F and GNB3

DIOPT Version :9

Sequence 1:NP_001303567.1 Gene:Gbeta13F / 32544 FlyBaseID:FBgn0001105 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_011519255.1 Gene:GNB3 / 2784 HGNCID:4400 Length:360 Species:Homo sapiens


Alignment Length:306 Identity:234/306 - (76%)
Similarity:265/306 - (86%) Gaps:0/306 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGN 65
            |.|::.||||||.||..|.|||||..|.:|.:..:.||.:||:||||||||||||||||||||..
Human     1 MGEMEQLRQEAEQLKKQIADARKACADVTLAELVSGLEVVGRVQMRTRRTLRGHLAKIYAMHWAT 65

  Fly    66 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTRE 130
            ||:.|||||||||||||||:||||||||||||||||||||||||::||||||||||||||||:||
Human    66 DSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSRE 130

  Fly   131 GNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQ 195
            |||:|||||..|.||||||||||||.|||||||.:|.|||||||.|.|.|:|||||.|:|:::|.
Human   131 GNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPD 195

  Fly   196 CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQE 260
            ...|:||||||||||||:|||.|:|||.||||||||:.|||||:|..||||||:|||||:|||||
Human   196 FNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQE 260

  Fly   261 LAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSG 306
            |..:||::|||||||||||.|||||.||||||||||||:||:||.|
Human   261 LICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKSERVG 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta13FNP_001303567.1 WD40 48..340 CDD:238121 208/259 (80%)
WD40 repeat 58..95 CDD:293791 31/36 (86%)
WD40 repeat 101..141 CDD:293791 35/39 (90%)
WD40 repeat 146..181 CDD:293791 27/34 (79%)
WD40 repeat 188..223 CDD:293791 22/34 (65%)
WD40 repeat 229..265 CDD:293791 26/35 (74%)
WD40 repeat 273..309 CDD:293791 29/34 (85%)
WD40 repeat 315..339 CDD:293791
GNB3XP_011519255.1 WD40 48..307 CDD:238121 208/259 (80%)
WD40 <49..307 CDD:225201 207/258 (80%)
WD40 repeat 58..95 CDD:293791 31/36 (86%)
WD40 repeat 101..141 CDD:293791 35/39 (90%)
WD40 repeat 146..181 CDD:293791 27/34 (79%)
WD40 repeat 188..223 CDD:293791 22/34 (65%)
WD40 repeat 229..265 CDD:293791 26/35 (74%)
WD40 repeat 273..318 CDD:293791 29/34 (85%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9916
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54867
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101247
Panther 1 1.100 - - O PTHR19850
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R475
SonicParanoid 1 1.000 - - X182
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.820

Return to query results.
Submit another query.