DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta13F and git5

DIOPT Version :9

Sequence 1:NP_001303567.1 Gene:Gbeta13F / 32544 FlyBaseID:FBgn0001105 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_595613.1 Gene:git5 / 2539974 PomBaseID:SPBC32H8.07 Length:305 Species:Schizosaccharomyces pombe


Alignment Length:299 Identity:126/299 - (42%)
Similarity:182/299 - (60%) Gaps:6/299 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 IQMRTRRTLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 107
            :.::..|.|:..|.||..:....|.:.|:|||.:..|:|||.||:|||......|.|:||||::|
pombe     9 VNIQGTRVLKNKLGKIPDIDISTDGKYLLSASTNDVLLVWDLHTSNKVAFFEAPSVWIMTCAFSP 73

  Fly   108 SGSYVACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIE 172
            |...:|.|||:|.|.:|:....:.:   ..||.||.|::|||:::||..::|.|||.:|..||||
pombe    74 STKSIAAGGLNNFCVVYDTSVPDAD---PVELVGHAGFVSCCKYVDDGHLLTGSGDKTCMFWDIE 135

  Fly   173 TGLQVTSFLGHTGDVMALSLAP-QCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFP 236
            ....::...||..|:::|...| ....||:|.||..|||||:|...|..||||:.||||:::|||
pombe   136 QAKAISVLKGHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCCATFPGNTSDINSISFFP 200

  Fly   237 NGQAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMK 301
            :...|.||::|...|.|||||..|:..||..: ...|.||.|||||:||....|. .|.|||::.
pombe   201 SNADFVTGAEDGIARCFDIRASAEIFQYSSPS-SSPINSVLFSKSGKLLFIAKDK-TCEVWDSIS 263

  Fly   302 AERSGILAGHDNRVSCLGVTENGMAVATGSWDSFLRVWN 340
            ::....|.||:||:|.|.:|.:|..:||||||..:|:|:
pombe   264 SKTITSLTGHENRISSLALTSDGTMLATGSWDECVRLWS 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta13FNP_001303567.1 WD40 48..340 CDD:238121 125/292 (43%)
WD40 repeat 58..95 CDD:293791 15/36 (42%)
WD40 repeat 101..141 CDD:293791 15/39 (38%)
WD40 repeat 146..181 CDD:293791 14/34 (41%)
WD40 repeat 188..223 CDD:293791 15/35 (43%)
WD40 repeat 229..265 CDD:293791 16/35 (46%)
WD40 repeat 273..309 CDD:293791 15/35 (43%)
WD40 repeat 315..339 CDD:293791 11/23 (48%)
git5NP_595613.1 WD40 1..>302 CDD:225201 125/297 (42%)
WD40 14..302 CDD:238121 125/292 (43%)
WD40 repeat 26..61 CDD:293791 14/34 (41%)
WD40 repeat 66..104 CDD:293791 15/40 (38%)
WD40 repeat 110..145 CDD:293791 14/34 (41%)
WD40 repeat 150..187 CDD:293791 15/36 (42%)
WD40 repeat 194..229 CDD:293791 15/34 (44%)
WD40 repeat 236..271 CDD:293791 15/35 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 257 1.000 Inparanoid score I758
OMA 1 1.010 - - QHG54867
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 1 1.000 - - otm47282
orthoMCL 1 0.900 - - OOG6_101247
Panther 1 1.100 - - LDO PTHR19850
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R475
SonicParanoid 1 1.000 - - X182
TreeFam 00.000 Not matched by this tool.
1110.900

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