DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta13F and gpb-1

DIOPT Version :10

Sequence 1:NP_525090.1 Gene:Gbeta13F / 32544 FlyBaseID:FBgn0001105 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001366714.1 Gene:gpb-1 / 174803 WormBaseID:WBGene00001679 Length:340 Species:Caenorhabditis elegans


Alignment Length:340 Identity:292/340 - (85%)
Similarity:320/340 - (94%) Gaps:0/340 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGN 65
            |:|||.||||||.||:.||:|||:|.||:|...|::|||||||||||||||||||||||||||.:
 Worm     1 MSELDQLRQEAEQLKSQIREARKSANDTTLATVASNLEPIGRIQMRTRRTLRGHLAKIYAMHWAS 65

  Fly    66 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTRE 130
            |||||||||||||||||||:|||||||||||||||||||||||||:||||||||:||||:|||||
 Worm    66 DSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTRE 130

  Fly   131 GNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQ 195
            ||||||||||||.|||||||||||||||||||||:|.|||||||.|.|:|.|||||||:|||:|.
 Worm   131 GNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPD 195

  Fly   196 CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQE 260
            .:||:||||||||||||||:|:|||||||||||||||.|||:|.|||||||||||||||||||||
 Worm   196 FRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFATGSDDATCRLFDIRADQE 260

  Fly   261 LAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGM 325
            |||||||||||||||||||||||||.||||||||||||:|:.||:|:|||||||||||||||:||
 Worm   261 LAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWDSMRQERAGVLAGHDNRVSCLGVTEDGM 325

  Fly   326 AVATGSWDSFLRVWN 340
            ||.||||||||::||
 Worm   326 AVCTGSWDSFLKIWN 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta13FNP_525090.1 WD40 48..340 CDD:238121 257/291 (88%)
WD40 repeat 58..95 CDD:293791 33/36 (92%)
WD40 repeat 101..141 CDD:293791 36/39 (92%)
WD40 repeat 146..181 CDD:293791 29/34 (85%)
WD40 repeat 188..223 CDD:293791 26/34 (76%)
WD40 repeat 229..265 CDD:293791 32/35 (91%)
WD40 repeat 273..309 CDD:293791 29/35 (83%)
WD40 repeat 315..339 CDD:293791 20/23 (87%)
gpb-1NP_001366714.1 WD40 48..340 CDD:238121 257/291 (88%)
WD40 repeat 58..95 CDD:293791 33/36 (92%)
WD40 repeat 101..141 CDD:293791 36/39 (92%)
WD40 repeat 146..181 CDD:293791 29/34 (85%)
WD40 repeat 188..223 CDD:293791 26/34 (76%)
WD40 repeat 229..265 CDD:293791 32/35 (91%)
WD40 repeat 273..309 CDD:293791 29/35 (83%)
WD40 repeat 315..339 CDD:293791 20/23 (87%)

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