DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta13F and Gnb5

DIOPT Version :9

Sequence 1:NP_001303567.1 Gene:Gbeta13F / 32544 FlyBaseID:FBgn0001105 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_034443.1 Gene:Gnb5 / 14697 MGIID:101848 Length:395 Species:Mus musculus


Alignment Length:344 Identity:185/344 - (53%)
Similarity:235/344 - (68%) Gaps:6/344 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NE-LDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGN 65
            || |.||:.||||||..:.:.|....|..|.|.|..:|.:|:..|:|||||:||..|:..|.|..
Mouse    51 NETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNKVLCMDWCK 115

  Fly    66 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNL--KT 128
            |.|.:||:|||||:|||||.||||.||:.:..:|||.|||||||..:|||||||.||:|.|  ..
Mouse   116 DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDK 180

  Fly   129 REGNVRVSRELPGHGGYLSCCRFLD-DNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSL 192
            .|......:.:..|..|||.|.|.: |.||:|:|||.:|.|||:|:|..:.||.||..||:.|.|
Mouse   181 NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDL 245

  Fly   193 APQ--CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDI 255
            ||.  ..|||||.||..|.:||:|.|.|.|.|..||||:|:|.::|:|.|||:|||||||||:|:
Mouse   246 APSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDL 310

  Fly   256 RADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGV 320
            |||:|:|:||.::||.|.:||.||.|||||.|||:|:..||||.:|..|..||.||:||||.|.|
Mouse   311 RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRV 375

  Fly   321 TENGMAVATGSWDSFLRVW 339
            :.:|.|..:||||..||||
Mouse   376 SPDGTAFCSGSWDHTLRVW 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta13FNP_001303567.1 WD40 48..340 CDD:238121 165/297 (56%)
WD40 repeat 58..95 CDD:293791 22/36 (61%)
WD40 repeat 101..141 CDD:293791 20/41 (49%)
WD40 repeat 146..181 CDD:293791 18/35 (51%)
WD40 repeat 188..223 CDD:293791 18/36 (50%)
WD40 repeat 229..265 CDD:293791 22/35 (63%)
WD40 repeat 273..309 CDD:293791 20/35 (57%)
WD40 repeat 315..339 CDD:293791 12/23 (52%)
Gnb5NP_034443.1 WD40 98..395 CDD:238121 165/297 (56%)
WD 1 103..142 23/38 (61%)
WD40 repeat 108..145 CDD:293791 22/36 (61%)
WD 2 145..184 22/38 (58%)
WD40 repeat 151..193 CDD:293791 20/41 (49%)
WD 3 193..234 20/40 (50%)
WD40 repeat 198..234 CDD:293791 18/35 (51%)
WD 4 236..278 21/41 (51%)
WD40 repeat 241..278 CDD:293791 18/36 (50%)
WD 5 279..318 25/38 (66%)
WD40 repeat 284..320 CDD:293791 22/35 (63%)
WD 6 320..362 23/41 (56%)
WD40 repeat 328..364 CDD:293791 20/35 (57%)
WD 7 365..394 16/28 (57%)
WD40 repeat 370..394 CDD:293791 12/23 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X182
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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