DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta13F and Gnb4

DIOPT Version :9

Sequence 1:NP_001303567.1 Gene:Gbeta13F / 32544 FlyBaseID:FBgn0001105 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001334991.1 Gene:Gnb4 / 14696 MGIID:104581 Length:340 Species:Mus musculus


Alignment Length:340 Identity:276/340 - (81%)
Similarity:313/340 - (92%) Gaps:0/340 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGN 65
            |:||:.||||||.|:|.|:|||||..|.:|:|..::::.:||||||||||||||||||||||||.
Mouse     1 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYAMHWGY 65

  Fly    66 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTRE 130
            |||.|||||||||||:|||:||||:|||||||||||||||||||:|||||||||:||||||||||
Mouse    66 DSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE 130

  Fly   131 GNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQ 195
            ||||||||||||.|||||||||||.||:|||||.:|.|||||||.|.|:|.||:||||:|||:|.
Mouse   131 GNVRVSRELPGHTGYLSCCRFLDDGQIITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPD 195

  Fly   196 CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQE 260
            .|||||||||||:||||||:|:|:|:|.||.||||||:|||:|.|||||||||||||||:|||||
Mouse   196 LKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRADQE 260

  Fly   261 LAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGM 325
            |.:|||||||||||||||||||||||||||||||:|||.:|..|||:||||||||||||||::||
Mouse   261 LLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRSGVLAGHDNRVSCLGVTDDGM 325

  Fly   326 AVATGSWDSFLRVWN 340
            ||||||||||||:||
Mouse   326 AVATGSWDSFLRIWN 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta13FNP_001303567.1 WD40 48..340 CDD:238121 247/291 (85%)
WD40 repeat 58..95 CDD:293791 31/36 (86%)
WD40 repeat 101..141 CDD:293791 37/39 (95%)
WD40 repeat 146..181 CDD:293791 26/34 (76%)
WD40 repeat 188..223 CDD:293791 25/34 (74%)
WD40 repeat 229..265 CDD:293791 29/35 (83%)
WD40 repeat 273..309 CDD:293791 29/35 (83%)
WD40 repeat 315..339 CDD:293791 21/23 (91%)
Gnb4NP_001334991.1 WD40 48..340 CDD:238121 247/291 (85%)
WD 1 53..92 33/38 (87%)
WD40 repeat 58..95 CDD:293791 31/36 (86%)
WD 2 95..134 36/38 (95%)
WD40 repeat 101..141 CDD:293791 37/39 (95%)
WD 3 141..179 29/37 (78%)
WD40 repeat 146..181 CDD:293791 26/34 (76%)
WD 4 182..221 29/38 (76%)
WD40 repeat 188..223 CDD:293791 25/34 (74%)
WD 5 224..263 33/38 (87%)
WD40 repeat 229..265 CDD:293791 29/35 (83%)
WD 6 268..307 33/38 (87%)
WD40 repeat 273..309 CDD:293791 29/35 (83%)
WD 7 310..339 26/28 (93%)
WD40 repeat 315..339 CDD:293791 21/23 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849166
Domainoid 1 1.000 66 1.000 Domainoid score I9873
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 609 1.000 Inparanoid score I921
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54867
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 1 1.000 - - otm43518
orthoMCL 1 0.900 - - OOG6_101247
Panther 1 1.100 - - O PTHR19850
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R475
SonicParanoid 1 1.000 - - X182
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.790

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