DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta13F and Gnb1

DIOPT Version :9

Sequence 1:NP_001303567.1 Gene:Gbeta13F / 32544 FlyBaseID:FBgn0001105 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001153488.1 Gene:Gnb1 / 14688 MGIID:95781 Length:340 Species:Mus musculus


Alignment Length:340 Identity:284/340 - (83%)
Similarity:312/340 - (91%) Gaps:0/340 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGN 65
            |:|||.||||||.|||.|||||||..|.:|.|...:::|:||||||||||||||||||||||||.
Mouse     1 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGT 65

  Fly    66 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTRE 130
            |||.|||||||||||:|||:||||||||||||||||||||||||:|||||||||:||||||||||
Mouse    66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE 130

  Fly   131 GNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQ 195
            |||||||||.||.||||||||||||||||||||.:|.|||||||.|.|:|.|||||||:|||||.
Mouse   131 GNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195

  Fly   196 CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQE 260
            .:.||||||||||||||:|||:|:|||.||||||||:.|||||.|||||||||||||||:|||||
Mouse   196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260

  Fly   261 LAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGM 325
            |..|||||||||||||:|||||||||||||||||||||.:||:|:|:||||||||||||||::||
Mouse   261 LMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGM 325

  Fly   326 AVATGSWDSFLRVWN 340
            |||||||||||::||
Mouse   326 AVATGSWDSFLKIWN 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta13FNP_001303567.1 WD40 48..340 CDD:238121 251/291 (86%)
WD40 repeat 58..95 CDD:293791 32/36 (89%)
WD40 repeat 101..141 CDD:293791 37/39 (95%)
WD40 repeat 146..181 CDD:293791 28/34 (82%)
WD40 repeat 188..223 CDD:293791 26/34 (76%)
WD40 repeat 229..265 CDD:293791 29/35 (83%)
WD40 repeat 273..309 CDD:293791 29/35 (83%)
WD40 repeat 315..339 CDD:293791 20/23 (87%)
Gnb1NP_001153488.1 WD40 48..340 CDD:238121 251/291 (86%)
WD 1 53..83 26/29 (90%)
WD40 repeat 58..95 CDD:293791 32/36 (89%)
WD 2 95..125 27/29 (93%)
WD40 repeat 101..141 CDD:293791 37/39 (95%)
WD 3 141..170 24/28 (86%)
WD40 repeat 146..181 CDD:293791 28/34 (82%)
WD 4 182..212 24/29 (83%)
WD40 repeat 188..223 CDD:293791 26/34 (76%)
WD 5 224..254 26/29 (90%)
WD40 repeat 229..265 CDD:293791 29/35 (83%)
WD 6 268..298 28/29 (97%)
WD40 repeat 273..309 CDD:293791 29/35 (83%)
WD 7 310..340 25/29 (86%)
WD40 repeat 315..339 CDD:293791 20/23 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9873
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55532
Inparanoid 1 1.050 609 1.000 Inparanoid score I921
Isobase 1 0.950 - 0 Normalized mean entropy S419
OMA 1 1.010 - - QHG54867
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 1 1.000 - - otm43518
orthoMCL 1 0.900 - - OOG6_101247
Panther 1 1.100 - - LDO PTHR19850
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R475
SonicParanoid 1 1.000 - - X182
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.820

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