DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myb and DMTF1

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_001135799.1 Gene:DMTF1 / 9988 HGNCID:14603 Length:760 Species:Homo sapiens


Alignment Length:645 Identity:122/645 - (18%)
Similarity:212/645 - (32%) Gaps:226/645 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TENGEEL-MNYGSNSDSEESEYSENEDTQVCDKDSQQNSNADSGYPLDSPEL------------- 56
            :||.:.. :...:.::..:.|.:|...||:   ...||...|...||.:.|:             
Human    79 SENDQSFEVTMTATTEVADDEVTEGTVTQI---QILQNEQLDEISPLGNEEVSAVSQAWFTTKED 140

  Fly    57 QDSKTTGQKGQNKSGKTSIGAVHPNYGFGKRWSKSE-DVL------------------------- 95
            :||.|      ||..|...|          .|||.| |:|                         
Human   141 KDSLT------NKGHKWKQG----------MWSKEEIDILMNNIERYLKARGIKDATEIIFEMSK 189

  Fly    96 ---------------------------------------------LKQLVETHGENWEIIGPHFK 115
                                                         ||:|...||.:|..||... 
Human   190 DERKDFYRTIAWGLNRPLFAVYRRVLRMYDDRNHVGKYTPEEIEKLKELRIKHGNDWATIGAAL- 253

  Fly   116 DRLEQQVQQRWAKVLNPELIKGPWTRDEDDMVIKLVRNFGPKK----------WTLIARYLNGRI 170
            .|....|:.| .:::......|.||.:|:..:.::|......:          |..:|..:..|.
Human   254 GRSASSVKDR-CRLMKDTCNTGKWTEEEEKRLAEVVHELTSTEPGDIVTQGVSWAAVAERVGTRS 317

  Fly   171 GKQCRERWHNHLN-PNIKKTAWTEKEDE---IIYQAHLELGNQ----WAKIAKRLPGRTDNAIKN 227
            .||||.:|.|:|| .....|.|| ||||   |:..|.|::.::    |..:|:            
Human   318 EKQCRSKWLNYLNWKQSGGTEWT-KEDEINLILRIAELDVADENDINWDLLAE------------ 369

  Fly   228 HWNST-----MRRKYDVERRSVNASGSDLKSSRTHLITLIKSGGISKCMNNMQHN-----KESGG 282
            .|:|.     :|.|:...:|.: |:..|:.     ...|||  |:.:...|.::|     .:||.
Human   370 GWSSVRSPQWLRSKWWTIKRQI-ANHKDVS-----FPVLIK--GLKQLHENQKNNPTLLENKSGS 426

  Fly   283 EAVNKSENADGASV----------TAVKGGDLAQESQDDHQKGSNLAHLSMQHLIKLTMPRQTPI 337
            ...|.:.|:....|          ||:....:|.     .|....:.|:|... ...|:..:| |
Human   427 GVPNSNTNSSVQHVQIRVARLEDNTAISSSPMAA-----LQIPVQITHVSSAD-SPATVDSET-I 484

  Fly   338 ILK----RTRKHIPETHHQAGCSSSETFNQEEAAGNARSRPPSSPVISPIKSLPFSPSHFL---K 395
            .|.    :|.:.:|..|.|...:......|..::........:||.::...:.|.||...:   .
Human   485 TLNSGTLQTFEILPSFHLQPTGTPGTYLLQTSSSQGLPLTLTASPTVTLTAAAPASPEQIIVHAL 549

  Fly   396 SP--CLTTFEDMDLRASTP-----------VTKVYNRVGMEIKKEMETSSIETPHKSQLGPRTPT 447
            ||  .|.|.:::.::..||           :|...::..:.:..::::|..              
Human   550 SPEHLLNTSDNVTVQCHTPRVIIQTVATEDITSSISQAELTVDSDIQSSDF-------------- 600

  Fly   448 PFKKALAAIGKKRDGRRYEPSSPSSLVED-LAEIIHEEHLSNSLTANNSKMMGAADQNST 506
                               |..|.:|..| ..:.||...::...:.|::.:...:|||||
Human   601 -------------------PEPPDALEADTFPDEIHHPKMTVEPSFNDAHVSKFSDQNST 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842 17/117 (15%)
Myb_DNA-bind_6 88..147 CDD:290632 21/129 (16%)
SANT 136..184 CDD:197842 16/58 (28%)
Myb_DNA-bind_6 139..197 CDD:290632 20/68 (29%)
SANT 188..235 CDD:197842 14/58 (24%)
Myb_DNA-binding 188..233 CDD:278669 14/56 (25%)
Cmyb_C 388..530 CDD:286408 22/136 (16%)
DMTF1NP_001135799.1 Interaction with CCND2. /evidence=ECO:0000250 1..237 26/176 (15%)
Required for DNA-binding. /evidence=ECO:0000250 87..458 82/412 (20%)
Required for transcriptional activation. /evidence=ECO:0000250 87..170 23/101 (23%)
SANT <89..438 CDD:333364 79/390 (20%)
Interaction with CCND1, CCND2 and CCND3. /evidence=ECO:0000250 176..760 97/529 (18%)
Myb_DNA-bind_6 228..284 CDD:316443 15/57 (26%)
Myb_DNA-binding 274..329 CDD:306708 14/54 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 414..435 4/20 (20%)
Required for transcriptional activation. /evidence=ECO:0000250 459..760 38/223 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 738..760
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2047
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.930

Return to query results.
Submit another query.