DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and NSI1

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_010309.3 Gene:NSI1 / 851590 SGDID:S000002433 Length:570 Species:Saccharomyces cerevisiae


Alignment Length:331 Identity:68/331 - (20%)
Similarity:121/331 - (36%) Gaps:119/331 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NSDSEESEYSENEDTQVCDKDSQQNSNADSGYPLDSPELQDSKTTGQ----KGQNKSGKTSI--- 75
            |.|.:|:.::.|..|.|......:....|..|...:|::.:......    ..:..:|.|::   
Yeast   190 NEDDKENNFNNNSSTLVRIYTDLEGIPNDGSYIKRTPKIPEKDVKSDDLILAPEENNGDTALLRS 254

  Fly    76 ---------GAVHPNYGFGKRWSKSEDVLLKQLVETHGENWEIIGPHFKDRLEQQVQQRW----- 126
                     ||:  ....||:::.||:..|.|.:|   |..:|.|   .|| .|..::.|     
Yeast   255 DIVKASVIDGAI--TKSIGKKFTPSEENALDQFIE---EYMKIRG---LDR-RQMCERIWSTDGV 310

  Fly   127 ---------AKVL----NPELIK------------GPWTRDEDDMVIKL-VRNFGPKKWTLIARY 165
                     :|||    ...:.|            |.||.:||..:.:| :...|  .||.:.:.
Yeast   311 IRDGFWANISKVLPYRTRSSIYKHIRRKYHIFEQRGKWTPEEDQELARLCLEKEG--HWTEVGKL 373

  Fly   166 LNGRIGKQCRERWHNHLNPNIKKTA--WTEKEDEI--------IYQAH-------LELGNQ---- 209
            | ||:.:.||:||.|::....|:.:  |:::|:|:        |.:||       ||..|:    
Yeast   374 L-GRMPEDCRDRWRNYMKCGSKRGSKRWSKEEEELLTTVVNEMIEEAHQYQRMKALEAANKNDRY 437

  Fly   210 ------------------------WAKIAKRLPG-RTDNAIKNHWNSTM--------------RR 235
                                    |..:::|:.| |:....:..||..:              .|
Yeast   438 NQMYSRGPKGKRISDNPTFKDMINWTVVSERMSGTRSRIQCRYKWNKLVTDEAARSMLSIPVSER 502

  Fly   236 KYDVER 241
            |:.:||
Yeast   503 KWLLER 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842 17/64 (27%)
Myb_DNA-bind_6 88..147 CDD:290632 21/88 (24%)
SANT 136..184 CDD:197842 18/60 (30%)
Myb_DNA-bind_6 139..197 CDD:290632 19/60 (32%)
SANT 188..235 CDD:197842 15/106 (14%)
Myb_DNA-binding 188..233 CDD:278669 15/90 (17%)
Cmyb_C 388..530 CDD:286408
NSI1NP_010309.3 REB1 53..567 CDD:227476 68/331 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344735
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2047
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

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