DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Myb and MYB54

DIOPT Version :9

Sequence 1:	NP_511170.1	Gene:	Myb / 32543	FlyBaseID:	FBgn0002914	Length:	657	Species:	Drosophila melanogaster
Sequence 2:	NP_177484.1	Gene:	MYB54 / 843676	AraportID:	AT1G73410	Length:	243	Species:	Arabidopsis thaliana

Alignment Length:	145	Identity:	59/145 - (40%)
Similarity:	77/145 - (53%)	Gaps:	6/145 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly   136 KGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNGRIGKQCRERWHNHLNPNIKKTAWTEKEDEIIY 200
            :|.|...||:.:..||..:||..|..||..|.||.||.||.||.|.|:|.|.:..:||:|:|.:.
plant     6 RGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLL 70

  Fly   201 QAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSVNASGSDLKSSRTHLITLIKSG 265
            .||...||:|:.||:..|||||||:||||:..|      .||:...|...|..|.|...:|:.|.
plant    71 AAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIM------ARRTRQTSKPRLLPSTTSSSSLMASE 129

  Fly   266 GISKCMNNMQHNKES 280
            .|........||..|
plant   130 QIMMSSGGYNHNYSS 144

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Myb	NP_511170.1	SANT	85..132	CDD:197842
		Myb_DNA-bind_6	88..147	CDD:290632	4/10 (40%)
		SANT	136..184	CDD:197842	22/47 (47%)
		Myb_DNA-bind_6	139..197	CDD:290632	26/57 (46%)
		SANT	188..235	CDD:197842	23/46 (50%)
		Myb_DNA-binding	188..233	CDD:278669	22/44 (50%)
		Cmyb_C	388..530	CDD:286408
MYB54	NP_177484.1	PLN03091	6..>113	CDD:215570	50/112 (45%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5147
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45614
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.910