DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB113

DIOPT Version :10

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_176811.1 Gene:MYB113 / 842955 AraportID:AT1G66370 Length:246 Species:Arabidopsis thaliana


Alignment Length:135 Identity:49/135 - (36%)
Similarity:78/135 - (57%) Gaps:6/135 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LIKGPWTRDEDDMVIKLVRNFGPKKWTLI-ARYLNGRIGKQCRERWHNHLNPNIKKTAWTEKEDE 197
            |.||.||.:||.::.:.:..:|..||..: .|....|..|.||.||.|:|.|:||:......|.:
plant     8 LRKGTWTTEEDILLRQCIDKYGEGKWHRVPLRTGLNRCRKSCRLRWLNYLKPSIKRGKLCSDEVD 72

  Fly   198 IIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVER----RSVNASGSDLKSSRTHL 258
            ::.:.|..|||:|:.||.||||||.|.:||:||:.:.:|:| ||    :.:|.:.:...:|....
plant    73 LVLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKKHD-ERCCKTKMINKNITSHPTSSAQK 136

  Fly   259 ITLIK 263
            |.::|
plant   137 IDVLK 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 Myb_DNA-bind_6 88..147 CDD:372817 7/12 (58%)
PLN03212 136..>236 CDD:178751 40/100 (40%)
Cmyb_C 388..>484 CDD:462753
MYB113NP_176811.1 PLN03212 7..>111 CDD:178751 41/102 (40%)
Blue background indicates that the domain is not in the aligned region.

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