DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB116

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_001321760.1 Gene:MYB116 / 839118 AraportID:AT1G25340 Length:308 Species:Arabidopsis thaliana


Alignment Length:192 Identity:57/192 - (29%)
Similarity:99/192 - (51%) Gaps:33/192 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EQQVQQRWAKVLNPELIKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNGRIGKQCRERWHNHLN 183
            |:..:||          |||||.:||.::...:.:.|..:|.|:|:    ..||.||.||.|:|.
plant    13 EEGAEQR----------KGPWTLEEDTLLTNYISHNGEGRWNLLAK----SSGKSCRLRWLNYLK 63

  Fly   184 PNIKKTAWTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSVNASG 248
            |:||:...|.:|..:|.:.|.:.||:|:||:|.|||||||.|||:|.:.:::    :.|.:|   
plant    64 PDIKRGNLTPQEQLLILELHSKWGNRWSKISKYLPGRTDNDIKNYWRTRVQK----QARQLN--- 121

  Fly   249 SDLKSSRTHLITLIKSGGISKCMNNMQHNKESGGEAVNKSENADGASVTAVKGGDLAQESQD 310
              :.|:....|.:::|....:.:|.::.|..:.....|..:..          |.:.::|:|
plant   122 --IDSNSHKFIEVVRSFWFPRLINEIKDNSYTNNIKANAPDLL----------GPILRDSKD 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842 3/12 (25%)
Myb_DNA-bind_6 88..147 CDD:290632 10/27 (37%)
SANT 136..184 CDD:197842 19/47 (40%)
Myb_DNA-bind_6 139..197 CDD:290632 21/57 (37%)
SANT 188..235 CDD:197842 21/46 (46%)
Myb_DNA-binding 188..233 CDD:278669 21/44 (48%)
Cmyb_C 388..530 CDD:286408
MYB116NP_001321760.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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