DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myb and MYB47

DIOPT Version :10

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_173306.1 Gene:MYB47 / 838453 AraportID:AT1G18710 Length:267 Species:Arabidopsis thaliana


Alignment Length:196 Identity:59/196 - (30%)
Similarity:99/196 - (50%) Gaps:19/196 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 KGPWTRDEDDMVIKLVRNFGPKKW-TLIARYLNGRIGKQCRERWHNHLNPNIKKTAWTEKEDEII 199
            ||.||.:||..:...:...|...| :|..|....|.||.||.||.|:|.|.|::..:|.:|:|.|
plant    14 KGEWTAEEDQKLGAYINEHGVCDWRSLPKRAGLQRCGKSCRLRWLNYLKPGIRRGKFTPQEEEEI 78

  Fly   200 YQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYD------------VERRSVNASGSDLK 252
            .|.|..|||:||.:||::..||||.|||||||.::::..            ::..:||.:.:|..
plant    79 IQLHAVLGNRWAAMAKKMQNRTDNDIKNHWNSCLKKRLSRKGIDPMTHEPIIKHLTVNTTNADCG 143

  Fly   253 SSRT----HLITLIKSGGISKCMNNMQHNKESGGEAVNKSENADGASVTAVKGGDLAQESQDDHQ 313
            :|.|    .......|.|.|:.:|.:.....|...::::.:.....|:  ::..|.|:|.::..:
plant   144 NSSTTTSPSTTESSPSSGSSRLLNKLAAGISSRQHSLDRIKYILSNSI--IESSDQAKEEEEKEE 206

  Fly   314 K 314
            :
plant   207 E 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 Myb_DNA-bind_6 88..147 CDD:372817 6/10 (60%)
PLN03212 136..>236 CDD:178751 45/100 (45%)
Cmyb_C 388..>484 CDD:462753
MYB47NP_173306.1 PLN03091 1..>129 CDD:215570 45/114 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.