DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Myb and MYB60

DIOPT Version :9

Sequence 1:	NP_511170.1	Gene:	Myb / 32543	FlyBaseID:	FBgn0002914	Length:	657	Species:	Drosophila melanogaster
Sequence 2:	NP_172358.1	Gene:	MYB60 / 837403	AraportID:	AT1G08810	Length:	280	Species:	Arabidopsis thaliana

Alignment Length:	268	Identity:	75/268 - (27%)
Similarity:	109/268 - (40%)	Gaps:	77/268 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly   136 KGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNG--RIGKQCRERWHNHLNPNIKKTAWTEKEDEI 198
            |||||.:||.:::..::..||..|..:... .|  |..|.||.||.|:|.|.||:..:|..|:.:
plant    14 KGPWTPEEDIILVSYIQEHGPGNWRSVPTN-TGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGM 77

  Fly   199 IYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKY-----DVERRSVNAS--GSDLKSSRT 256
            |......|||:||.||..||.||||.|||:||:.:::|.     |...||.|.:  .|..:::..
plant    78 IIHLQALLGNKWASIASYLPQRTDNDIKNYWNTHLKKKLNKSDSDERSRSENIALQTSSTRNTIN 142

  Fly   257 HLITLIKS-GGISKCM------------------NNMQ--------------------------H 276
            |..|...| ..||:.:                  :.||                          |
plant   143 HRSTYASSTENISRLLEGWMRASPKSSTSTTFLEHKMQNRTNNFIDHHSDQFPYEQLQGSWEEGH 207

  Fly   277 NKESGG---EAVNKSENADGASVTAVKGGDLAQESQDDHQKGSNLAHL----------------S 322
            :|...|   :.:..|||.:|..|.. :.||  .|..|||.....|..:                .
plant   208 SKGINGDDDQGIKNSENNNGDDVHH-EDGD--HEDDDDHNATPPLTFIEKWLLEETSTTGGQMEE 269

  Fly   323 MQHLIKLT 330
            |.||::|:
plant   270 MSHLMELS 277

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Myb	NP_511170.1	SANT	85..132	CDD:197842
		Myb_DNA-bind_6	88..147	CDD:290632	7/10 (70%)
		SANT	136..184	CDD:197842	19/49 (39%)
		Myb_DNA-bind_6	139..197	CDD:290632	21/59 (36%)
		SANT	188..235	CDD:197842	21/46 (46%)
		Myb_DNA-binding	188..233	CDD:278669	21/44 (48%)
		Cmyb_C	388..530	CDD:286408
MYB60	NP_172358.1	PLN03212	5..>125	CDD:178751	45/111 (41%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5147
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810