DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myb and MYBR1

DIOPT Version :10

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_201531.1 Gene:MYBR1 / 836865 AraportID:AT5G67300 Length:305 Species:Arabidopsis thaliana


Alignment Length:216 Identity:75/216 - (34%)
Similarity:117/216 - (54%) Gaps:45/216 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 IKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNGRIGKQCRERWHNHLNPNIKKTAWTEKEDEII 199
            |||||:.:||:.:.:||..:||:.||:|::.:.||.||.||.||.|.|:|.::...::.:|||.|
plant     5 IKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFSAEEDETI 69

  Fly   200 YQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRK--------YDVE------RRSVNA---- 246
            .:||.:.||:||.||:.|.||||||:|||||||::||        ||..      :|||:|    
plant    70 ARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSEDHRPVKRSVSAGSPP 134

  Fly   247 ------------SGSDLKSSRTHLITLIKSGGISKCMNNMQHNKESGG-------EAVNKSENAD 292
                        :|||:..|.|  |.::.|..:.|.:      ...|.       |..:.|::..
plant   135 VVTGLYMSPGSPTGSDVSDSST--IPILPSVELFKPV------PRPGAVVLPLPIETSSSSDDPP 191

  Fly   293 GASVTAVKGGDLAQESQDDHQ 313
            .:...::.|.|:::||...|:
plant   192 TSLSLSLPGADVSEESNRSHE 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 Myb_DNA-bind_6 88..147 CDD:372817 7/11 (64%)
PLN03212 136..>236 CDD:178751 50/99 (51%)
Cmyb_C 388..>484 CDD:462753
MYBR1NP_201531.1 PLN03091 6..>234 CDD:215570 74/215 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.