DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB68

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_201380.1 Gene:MYB68 / 836708 AraportID:AT5G65790 Length:374 Species:Arabidopsis thaliana


Alignment Length:445 Identity:96/445 - (21%)
Similarity:170/445 - (38%) Gaps:145/445 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 KGPWTRDEDDMVIKLVRNFGP-KKWTLIARYLN-GRIGKQCRERWHNHLNPNIKKTAWTEKEDEI 198
            ||||:.:||..:...:.|.|. ..|..:.:.:. .|.||.||.||.|:|.||||...::|:||.|
plant    14 KGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLNYLRPNIKHGGFSEEEDNI 78

  Fly   199 IYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSVNASGSDLKSSRTHLITLIK 263
            |...::.:|::|:.||.:|||||||.|||:||:.:::|.      :|....:.:.:|        
plant    79 ICNLYVTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL------LNKQRKEFQEAR-------- 129

  Fly   264 SGGISKCMNNMQHNKESGGEAVNKS------ENADGASVTAVKGGDLAQESQDDHQ--------- 313
               :.:.|..|:..::..|:..:..      .|..|:|...:    |.|.....||         
plant   130 ---MKQEMVMMKRQQQGQGQGQSNGSTDLYLNNMFGSSPWPL----LPQLPPPHHQIPLGMMEPT 187

  Fly   314 --------KGSNLAH---LSMQHLIKLTMPRQTPIILKRTRKHIPETHHQAGCSSSETFNQEEAA 367
                    ...||..   :::::::|:...::      ||.   |:.|||...::...|:     
plant   188 SCNYYQTTPSCNLEQKPLITLKNMVKIEEEQE------RTN---PDHHHQDSVTNPFDFS----- 238

  Fly   368 GNARSRPPSSPVISPIKSLPFSPSHFLKSPCLTTFEDMDLRASTPVTKVYNRVGMEIKKEMETSS 432
                           ...|...|:::|.|                      ..|.|....:.:||
plant   239 ---------------FSQLLLDPNYYLGS----------------------GGGGEGDFAIMSSS 266

  Fly   433 IETPHKSQLGPRTPTPFKKALAAIGKKRDGRRYEPSSPSSLVEDLAEIIHEEHLSNSLTANNSKM 497
            ..:|..:....:.|:..::.|...|..        :..:..:.|:. |.:..::.|..|..|:|:
plant   267 TNSPLPNTSSDQHPSQQQEILQWFGSS--------NFQTEAINDMF-INNNNNIVNLETIENTKV 322

  Fly   498 MG--------------------AADQNSTLSTE-------------YNAQSPPHM 519
            .|                    :||| ||:|.|             :||  |.|:
plant   323 YGDASVAGAAVRAALGGGTTSTSADQ-STISWEDITSLVNSEDASYFNA--PNHV 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842
Myb_DNA-bind_6 88..147 CDD:290632 6/10 (60%)
SANT 136..184 CDD:197842 18/49 (37%)
Myb_DNA-bind_6 139..197 CDD:290632 21/59 (36%)
SANT 188..235 CDD:197842 21/46 (46%)
Myb_DNA-binding 188..233 CDD:278669 21/44 (48%)
Cmyb_C 388..530 CDD:286408 29/165 (18%)
MYB68NP_201380.1 SANT 14..64 CDD:197842 18/49 (37%)
Myb_DNA-binding 14..62 CDD:278669 17/47 (36%)
Myb_DNA-binding 68..113 CDD:278669 21/44 (48%)
SANT 71..115 CDD:197842 21/43 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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