DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB96

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_201053.2 Gene:MYB96 / 836367 AraportID:AT5G62470 Length:352 Species:Arabidopsis thaliana


Alignment Length:393 Identity:94/393 - (23%)
Similarity:155/393 - (39%) Gaps:105/393 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 KGPWTRDEDDMVIKLVRNFGPKKWTLIARYLN-GRIGKQCRERWHNHLNPNIKKTAWTEKEDEII 199
            |||||.:||.:::..::..||..|..:..:.. .|..|.||.||.|:|.|.||:..:||.|::.|
plant    14 KGPWTPEEDIILVSYIQEHGPGNWRSVPTHTGLRRCSKSCRLRWTNYLRPGIKRGNFTEHEEKTI 78

  Fly   200 YQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSVNASGSDLKSSRTHLITLIKS 264
            ......|||:||.||..||.||||.|||:||:.:::|.    :.:|.||.:            .:
plant    79 VHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKL----KKINESGEE------------DN 127

  Fly   265 GGISKCMNNMQHNKESGGEAVNKSENADGASVTAVKGGDLAQESQDDHQKGSNLAHLSMQHLIKL 329
            .|:|....:.|.|.:|    .||              |...:..|.|    .|:|..::...:.|
plant   128 DGVSSSNTSSQKNHQS----TNK--------------GQWERRLQTD----INMAKQALCEALSL 170

  Fly   330 TMPRQ---------TPIILKRTRKH-----IPETHHQAGCSSSETFNQEEAAGNARSRPPSSPVI 380
            ..|..         ||:|.::..::     :...:..:..|||.|   .....|..:..||....
plant   171 DKPSSTLSSSSSLPTPVITQQNIRNFSSALLDRCYDPSSSSSSTT---TTTTSNTTNPYPSGVYA 232

  Fly   381 SPIKSLPFSPSHFLKSPCLTTFEDMDLRASTPVTKVYNRVGMEIKKEMETSSIETPHKSQLGPRT 445
            |..:::......|:|.    |.:.:.|.:|:||                         |:.||.|
plant   233 SSAENIARLLQDFMKD----TPKALTLSSSSPV-------------------------SETGPLT 268

  Fly   446 PTPFKKALAAIGKKRDGRRYEPS--------SPSSLVEDLAEIIHEEHLSNSLTANNSKMMGAAD 502
                    ||:.:: .|..:|.|        ...:|.:: ....|::.:...:|.:...  |...
plant   269 --------AAVSEE-GGEGFEQSFFSFNSMDETQNLTQE-TSFFHDQVIKPEITMDQDH--GLIS 321

  Fly   503 QNS 505
            |.|
plant   322 QGS 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842
Myb_DNA-bind_6 88..147 CDD:290632 7/10 (70%)
SANT 136..184 CDD:197842 18/48 (38%)
Myb_DNA-bind_6 139..197 CDD:290632 21/58 (36%)
SANT 188..235 CDD:197842 22/46 (48%)
Myb_DNA-binding 188..233 CDD:278669 22/44 (50%)
Cmyb_C 388..530 CDD:286408 22/126 (17%)
MYB96NP_201053.2 PLN03212 5..>116 CDD:178751 43/101 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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