DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myb and MYB99

DIOPT Version :10

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_201038.1 Gene:MYB99 / 836353 AraportID:AT5G62320 Length:245 Species:Arabidopsis thaliana


Alignment Length:209 Identity:69/209 - (33%)
Similarity:99/209 - (47%) Gaps:49/209 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LIKGPWTRDEDDMVIKLVRNFG--------------PKKWTLIARYLNG--RIGKQCRERWHNHL 182
            |.|||||.:||..::..:|..|              ||        |.|  |.||.||.||.|:|
plant    13 LRKGPWTVEEDGKLVDFLRARGNCGGGGGGWCWRDVPK--------LAGLRRCGKSCRLRWTNYL 69

  Fly   183 NPNIKKTAWTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKY-------DVE 240
            .|::|:..:||:|.:::...|..|||:|:|||..|||||||.|||:||:.::||.       :..
plant    70 RPDLKRGLFTEEEIQLVIDLHARLGNRWSKIAVELPGRTDNDIKNYWNTHIKRKLIRMGIDPNTH 134

  Fly   241 RR----SVNASGSDLKS-----SRTHLITLIKSGGISKCMNNMQHNKESGGEAVNKS---ENADG 293
            ||    .||...:.|.:     |.|.:...:|:...:....|:....:..|:....|   ||.:|
plant   135 RRFDQQKVNEEETILVNDPKPLSETEVSVALKNDTSAVLSGNLNQLADVDGDDQPWSFLMENDEG 199

  Fly   294 ASVTAVKGGDLAQE 307
            .      |||.|.|
plant   200 G------GGDAAGE 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 Myb_DNA-bind_6 88..147 CDD:372817 8/12 (67%)
PLN03212 136..>236 CDD:178751 47/115 (41%)
Cmyb_C 388..>484 CDD:462753
MYB99NP_201038.1 PLN03091 3..>180 CDD:215570 59/174 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.