DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB59

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_200786.1 Gene:MYB59 / 836099 AraportID:AT5G59780 Length:235 Species:Arabidopsis thaliana


Alignment Length:186 Identity:67/186 - (36%)
Similarity:108/186 - (58%) Gaps:6/186 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 KVLNPELIKGPWTRDEDDMVIKLVRNFGPKKWTLIARY--LNGRIGKQCRERWHNHLNPNIKKTA 190
            |::..|..|||||..||.:::..|..||.::|..:|:.  || |.||.||.||.|:|:|.:|:..
plant     2 KLVQEEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLN-RTGKSCRLRWVNYLHPGLKRGK 65

  Fly   191 WTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERR--SVNASGSDLKS 253
            .|.:|:.::.:.|.:.||:|:|||::|||||||.|||:|.:.||:|...::|  |..:|.|:..|
plant    66 MTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPMSPTSSSSNCCS 130

  Fly   254 SRTHLITLIKSGGISKCMNNMQHNKESGGEAVNKSENADGASV-TAVKGGDLAQES 308
            |.....|...:||.:..||....:.....:.:.:..:..||:| ..||....:::|
plant   131 SSMTTTTSQDTGGSNGKMNQECEDGYYSMDDIWREIDQSGANVIKPVKDNYYSEQS 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842 1/3 (33%)
Myb_DNA-bind_6 88..147 CDD:290632 9/18 (50%)
SANT 136..184 CDD:197842 23/49 (47%)
Myb_DNA-bind_6 139..197 CDD:290632 24/59 (41%)
SANT 188..235 CDD:197842 21/46 (46%)
Myb_DNA-binding 188..233 CDD:278669 20/44 (45%)
Cmyb_C 388..530 CDD:286408
MYB59NP_200786.1 PLN03091 5..>115 CDD:215570 49/110 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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