DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB36

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_200570.1 Gene:MYB36 / 835866 AraportID:AT5G57620 Length:333 Species:Arabidopsis thaliana


Alignment Length:249 Identity:65/249 - (26%)
Similarity:111/249 - (44%) Gaps:57/249 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 KGPWTRDEDDMVIKLVRNFGP-KKWTLIARYLN-GRIGKQCRERWHNHLNPNIKKTAWTEKEDEI 198
            ||||:.:||..:...:..:|. ..|..:.:.:. .|.||.||.||.|:|.||||...::|:||.|
plant    14 KGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRI 78

  Fly   199 IYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSVNASGSDLKSSRTHLITLIK 263
            |...::.:|::|:.||.:|||||||.|||:||:.:::|....::.:|...|...|:.        
plant    79 ILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGRQKQMNRQDSITDSTE-------- 135

  Fly   264 SGGISKCMNNMQHNKESGGEAVNKS-ENADGASVTAVKGGDLAQESQDDHQKGSNLAHLSMQHLI 327
                    ||:.:|..      ||| :|...:::..::                  .|:.:|:|.
plant   136 --------NNLSNNNN------NKSPQNLSNSALERLQ------------------LHMQLQNLQ 168

  Fly   328 K---------LTMPRQTPIILKRTRKHIP-----ETHHQAGCSSSETFNQEEAA 367
            .         :..|:..|::...|....|     |:.|..|.:.....|..:.|
plant   169 SPFSSFYNNPILWPKLHPLLQSTTTNQNPKLASQESFHPLGVNVDHQHNNTKLA 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842
Myb_DNA-bind_6 88..147 CDD:290632 6/10 (60%)
SANT 136..184 CDD:197842 17/49 (35%)
Myb_DNA-bind_6 139..197 CDD:290632 20/59 (34%)
SANT 188..235 CDD:197842 21/46 (46%)
Myb_DNA-binding 188..233 CDD:278669 21/44 (48%)
Cmyb_C 388..530 CDD:286408
MYB36NP_200570.1 PLN03091 1..>122 CDD:215570 43/107 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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