DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB56

DIOPT Version :10

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_197282.1 Gene:MYB56 / 831648 AraportID:AT5G17800 Length:323 Species:Arabidopsis thaliana


Alignment Length:304 Identity:86/304 - (28%)
Similarity:131/304 - (43%) Gaps:63/304 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LQDSKTTGQKGQNKSGKTSIGAVHPNYGFGKRWSKSEDVLLKQLVETHGENWEIIGPHFKDRLEQ 120
            |.:|.|...|  ......||...||:       :||..||..:  :.||..        :...|:
plant    31 LPNSHTAACK--TSLNNPSISRNHPH-------NKSASVLESE--DEHGNE--------RGENEK 76

  Fly   121 QVQQRWAKVLNPELI-KGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNGRIGKQCRERWHNHLNP 184
            .::.|....:|.::. :|.|...||..:.:||..|||:.|.||:.:|.||.||.||.||.|.|:|
plant    77 SLRMRGKSGINTKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDP 141

  Fly   185 NIKKTAWTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSVNASGS 249
            .|.|.|:||:|:..:..||...||:||.|::..|||||||:||||:..|.|:....:|.......
plant   142 RINKRAFTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRESQRQRQQPPP 206

  Fly   250 DLKSSRTHLITLIKSGGISKCMNNMQHNKESGGEAVNKSENADGASVTAV--------------- 299
            .|  ||...:|:     .|.|..|.       |:.:|:.::.|..|..:.               
plant   207 TL--SRDAEMTV-----SSSCRYNQ-------GKFINEEDDDDDVSAVSTCTTELSLTPPSSAYQ 257

  Fly   300 -------------KGGDLAQESQDDHQKGSNLAHLSMQHLIKLT 330
                         |.|...|.::.:...|..:.|.: .|.|.::
plant   258 PRFFNYDSTLASGKDGQCVQRAEVNGIYGKKMDHQN-HHTISVS 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 Myb_DNA-bind_6 88..147 CDD:372817 13/59 (22%)
PLN03212 136..>236 CDD:178751 49/99 (49%)
Cmyb_C 388..>484 CDD:462753
MYB56NP_197282.1 PLN03091 93..>219 CDD:215570 55/132 (42%)
Blue background indicates that the domain is not in the aligned region.

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