DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB16

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_197035.1 Gene:MYB16 / 831383 AraportID:AT5G15310 Length:326 Species:Arabidopsis thaliana


Alignment Length:351 Identity:95/351 - (27%)
Similarity:143/351 - (40%) Gaps:79/351 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LIKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLN-GRIGKQCRERWHNHLNPNIKKTAWTEKEDE 197
            |.|||||.:||..::..:...|...|..:..... .|.||.||.||.|:|.|:||:..:..:|::
plant    12 LKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLHRCGKSCRLRWTNYLRPDIKRGKFNLQEEQ 76

  Fly   198 IIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSVNASGSDLKSSRTHLITLI 262
            .|.|.|..|||:|:.||..||.||||.|||:||:.::::       :...|.|..:.:....|.:
plant    77 TIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKR-------LVKMGIDPVTHKPKNETPL 134

  Fly   263 KSGGISKCMNNMQHNKESGGEAVNKSENADGASVTAVKGGDLAQESQDDHQKGSNLAHLSMQHLI 327
            .|.|:||             .|...|..|...|........||:||:        |.||  ||. 
plant   135 SSLGLSK-------------NAAILSHTAQWESARLEAEARLARESK--------LLHL--QHY- 175

  Fly   328 KLTMPRQTPIILKRTRKHIPETHHQAGCSSSETFNQEEAAGNARSRP--PSSPVISPIKSLPFSP 390
                  ||        |...:.||..|      |..:....|..::|  ....:.||..::.|| 
plant   176 ------QT--------KTSSQPHHHHG------FTHKSLLPNWTTKPHEDQQQLESPTSTVSFS- 219

  Fly   391 SHFLKSPCLTTFEDMDLRASTP--VTKVYNRVGMEIKKEMETSSI-ETPHK---SQLGPRTPTPF 449
                           :::.|.|  :..|.:..|:.:.||.|...| .|.|:   :|:|......|
plant   220 ---------------EMKESIPAKIEFVGSSTGVTLMKEPEHDWINSTMHEFETTQMGEGIEEGF 269

  Fly   450 KKALA---AIGKKRDGRRYEPSSPSS 472
            ...|.   :|.:...|.:.|.:..||
plant   270 TGLLLGGDSIDRSFSGDKNETAGESS 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842
Myb_DNA-bind_6 88..147 CDD:290632 8/12 (67%)
SANT 136..184 CDD:197842 18/48 (38%)
Myb_DNA-bind_6 139..197 CDD:290632 19/58 (33%)
SANT 188..235 CDD:197842 21/46 (46%)
Myb_DNA-binding 188..233 CDD:278669 21/44 (48%)
Cmyb_C 388..530 CDD:286408 21/94 (22%)
MYB16NP_197035.1 PLN03091 1..>131 CDD:215570 45/125 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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