DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB85

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_567664.1 Gene:MYB85 / 828364 AraportID:AT4G22680 Length:266 Species:Arabidopsis thaliana


Alignment Length:129 Identity:51/129 - (39%)
Similarity:78/129 - (60%) Gaps:9/129 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 KGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNG--RIGKQCRERWHNHLNPNIKKTAWTEKEDEI 198
            |||||.:||..:|..:...|...|..:.: |.|  |.||.||.||.|:|.|::|:...:..|:::
plant    14 KGPWTVEEDKKLINFILTNGHCCWRALPK-LAGLRRCGKSCRLRWTNYLRPDLKRGLLSHDEEQL 77

  Fly   199 IYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKY------DVERRSVNASGSDLKSSRT 256
            :...|..|||:|:|||.||||||||.||||||:.:::|.      .:..:.:|...|::.:|:|
plant    78 VIDLHANLGNKWSKIASRLPGRTDNEIKNHWNTHIKKKLLKMGIDPMTHQPLNQEPSNIDNSKT 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842
Myb_DNA-bind_6 88..147 CDD:290632 7/10 (70%)
SANT 136..184 CDD:197842 21/49 (43%)
Myb_DNA-bind_6 139..197 CDD:290632 21/59 (36%)
SANT 188..235 CDD:197842 23/46 (50%)
Myb_DNA-binding 188..233 CDD:278669 23/44 (52%)
Cmyb_C 388..530 CDD:286408
MYB85NP_567664.1 PLN03091 1..>131 CDD:215570 47/117 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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