DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB3R2

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_567179.1 Gene:MYB3R2 / 827977 AraportID:AT4G00540 Length:437 Species:Arabidopsis thaliana


Alignment Length:484 Identity:127/484 - (26%)
Similarity:214/484 - (44%) Gaps:125/484 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DSQQNSNADSGYPLDSPELQDS---KTTGQKGQNKSGKTSIGAVHPNYGFGKRWSKSEDVLLKQL 99
            :|:.::|.|...|:.:  :.||   :.:|...::..|               .|:..||.:|..:
plant    11 ESESDNNTDDVTPIFA--IDDSSKGRVSGPTRRSTKG---------------GWTAEEDQILTNV 58

  Fly   100 VETH-GENWEII-----GPHFKDRLEQQVQQRWAKVLNPELIKGPWTRDEDDMVIKLVRNF---G 155
            |:.: |.||:.|     |.....|.:.|.|.||.|||:|.|.||.|.::||:::.:||:::   .
plant    59 VKKYQGRNWKRIAECLPGSEENRRNDVQCQHRWLKVLDPSLQKGAWKKEEDELLSELVKDYMEND 123

  Fly   156 PKKWTLIARYLNGRIGKQCRERWHNHLNPNIKKTAWTEKEDEIIYQAHLELGNQWAKIAKRLPGR 220
            ...|:.|::.|.|||||||||||||||||.|.|:.||.:|:.|:.||....||:||:|||.||||
plant   124 RPPWSKISKELPGRIGKQCRERWHNHLNPTIIKSPWTREEELILVQAQRGNGNKWAEIAKLLPGR 188

  Fly   221 TDNAIKNHWNSTMRRKYDVERRSVNASGSDLKSSRTHLITLIKSGGISKCMNNMQHNKESGGEAV 285
            |:|.||||||.:::::              |:...::|.:.:..|           :|.|.|...
plant   189 TENNIKNHWNCSVKKR--------------LEQFPSNLFSGVVYG-----------SKPSSGFEY 228

  Fly   286 N----KSENADGASVTAVKGGDLAQESQDDHQKGSNLAHLSMQHLIKLTMPRQTPIILKRTRKHI 346
            |    ::...:....:.:|  :.|:..|.|              .:.||:               
plant   229 NFFNQRNTMVESCITSQIK--EAAKSPQRD--------------FLDLTL--------------- 262

  Fly   347 PETHHQAGCSSSETFNQEEAAGNARSRPPSSPVISPIKSLPFSPSHFLKSPCLTTFEDMDLRAST 411
             ..:.::..||:.:...||:.        ||.|.|....|         :.||.|.::.:  ..|
plant   263 -GLNWRSISSSTSSLRGEESV--------SSSVDSVCARL---------NACLETPQNSN--NDT 307

  Fly   412 PVTKVYNRVGMEIKKEMETSSIETPHKSQLGPRTPTPFKKALAAIGKKRDGRRYEPSSPSSLVED 476
            ...|....  |:.:..|...:.:||   .:..:|.:|      |.|.||..::|:...|:.....
plant   308 VCVKEVRE--MKERLRMAARTFDTP---SIISKTSSP------ASGLKRLRQKYDTPFPTDARSH 361

  Fly   477 LAEIIHEEHLSNSLTANNSKMMGAADQNS 505
            ::.  .|:|   |::|:.|.......:|:
plant   362 MSS--EEDH---SVSASPSSKYRFVKRNT 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842 18/52 (35%)
Myb_DNA-bind_6 88..147 CDD:290632 25/64 (39%)
SANT 136..184 CDD:197842 25/50 (50%)
Myb_DNA-bind_6 139..197 CDD:290632 30/60 (50%)
SANT 188..235 CDD:197842 26/46 (57%)
Myb_DNA-binding 188..233 CDD:278669 26/44 (59%)
Cmyb_C 388..530 CDD:286408 23/118 (19%)
MYB3R2NP_567179.1 Myb_DNA-bind_6 47..112 CDD:372817 25/64 (39%)
PLN03091 99..>207 CDD:215570 56/121 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000329
OrthoInspector 1 1.000 - - otm2880
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45614
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.870

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