DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB11

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_191820.1 Gene:MYB11 / 825435 AraportID:AT3G62610 Length:343 Species:Arabidopsis thaliana


Alignment Length:186 Identity:59/186 - (31%)
Similarity:84/186 - (45%) Gaps:43/186 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 KGPWTRDEDDMVIKLVRNFGPKKWTLIARYLN-GRIGKQCRERWHNHLNPNIKKTAWTEKEDEII 199
            ||.||.:||..:...:::.|...|..:.:... .|.||.||.||.|:|..:||:...|.:|:::|
plant    14 KGRWTAEEDRTLSDYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINYLRSDIKRGNITPEEEDVI 78

  Fly   200 YQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKY-----------DVE-------RRSVNA 246
            .:.|..||.:|:.||..|||||||.|||:|||.:.||.           .||       ||....
plant    79 VKLHSTLGTRWSTIASNLPGRTDNEIKNYWNSHLSRKLHGYFRKPTVANTVENAPPPPKRRPGRT 143

  Fly   247 SGSDLKSSRTHLITLIKSGGISKCMNNMQHNKESGGEAVNKS---------ENADG 293
            |.|.:|               .|.:.|.:::|.......|||         ||.:|
plant   144 SRSAMK---------------PKFILNPKNHKTPNSFKANKSDIVLPTTTIENGEG 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842
Myb_DNA-bind_6 88..147 CDD:290632 6/10 (60%)
SANT 136..184 CDD:197842 17/48 (35%)
Myb_DNA-bind_6 139..197 CDD:290632 19/58 (33%)
SANT 188..235 CDD:197842 22/46 (48%)
Myb_DNA-binding 188..233 CDD:278669 22/44 (50%)
Cmyb_C 388..530 CDD:286408
MYB11NP_191820.1 SANT 1..>116 CDD:333364 42/101 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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