DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB45

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_190461.1 Gene:MYB45 / 824053 AraportID:AT3G48920 Length:261 Species:Arabidopsis thaliana


Alignment Length:206 Identity:61/206 - (29%)
Similarity:102/206 - (49%) Gaps:21/206 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 KGPWTRDEDDMVIKLVRNFGPKKWTLIARYLN-GRIGKQCRERWHNHLNPNIKKTAWTEKEDEII 199
            ||.|:.:||:.:...|..:|...|:.|..... .|.||.||.||.|:|.|.:||:.:|::|:.|:
plant    20 KGLWSPEEDEKLRSHVLKYGHGCWSTIPLQAGLQRNGKSCRLRWVNYLRPGLKKSLFTKQEETIL 84

  Fly   200 YQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSVNASGSDLKSSRTHLITLIKS 264
            ...|..|||:|::|:|.|||||||.|||:|:|.:::...:::....      |..:|.|||    
plant    85 LSLHSMLGNKWSQISKFLPGRTDNEIKNYWHSNLKKGVTLKQHETT------KKHQTPLIT---- 139

  Fly   265 GGISKCMNNMQHNKESGGEAVNKSE--NADGASVTAVKGGDLAQESQDDHQKGSNLAHLSMQHLI 327
                ..:..:|.:.|....::|..|  ||..:|.:.    :|......||....:.:.....::.
plant   140 ----NSLEALQSSTERSSSSINVGETSNAQTSSFSP----NLVFSEWLDHSLLMDQSPQKSSYVQ 196

  Fly   328 KLTMPRQTPII 338
            .|.:|.:...|
plant   197 NLVLPEERGFI 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842
Myb_DNA-bind_6 88..147 CDD:290632 5/10 (50%)
SANT 136..184 CDD:197842 18/48 (38%)
Myb_DNA-bind_6 139..197 CDD:290632 21/58 (36%)
SANT 188..235 CDD:197842 23/46 (50%)
Myb_DNA-binding 188..233 CDD:278669 23/44 (52%)
Cmyb_C 388..530 CDD:286408
MYB45NP_190461.1 PLN03091 15..>126 CDD:215570 43/105 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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