DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB110

DIOPT Version :10

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_001078220.1 Gene:MYB110 / 822542 AraportID:AT3G29020 Length:305 Species:Arabidopsis thaliana


Alignment Length:254 Identity:75/254 - (29%)
Similarity:111/254 - (43%) Gaps:55/254 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 KGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNGRIGKQCRERWHNHLNPNIKKTAWTEKEDEIIY 200
            :|.|...||..:::||..:||:.|..||..:.||.||.||.||.|.|:|.|.|.|::::|:|.:.
plant    67 RGHWRISEDTQLMELVSVYGPQNWNHIAESMQGRTGKSCRLRWFNQLDPRINKRAFSDEEEERLL 131

  Fly   201 QAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSV--NASGSDLKSSRTHLITLIK 263
            .||...||:||.|||...||||||:||||:..|.||...:..|.  ..:||..:|:..|.|..:.
plant   132 AAHRAFGNKWAMIAKLFNGRTDNALKNHWHVLMARKMRQQSSSYVQRFNGSAHESNTDHKIFNLS 196

  Fly   264 SGGISKCMNNMQHNKESGGEAVNKSENADGASVTAVKGGDL---AQESQDDHQKGSNLAHLSMQH 325
            .|.:..                ::..|....|...:|.|..   ||..|:::...          
plant   197 PGNVDD----------------DEDVNLKKCSWEMLKEGTTNLKAQYLQEEYSSS---------- 235

  Fly   326 LIKLTMPRQTPIILKRTRKHIPETHHQAGCSSSETFN-------QEEAAGNARSRPPSS 377
                .||.|.|             ||......:::..       ||.::.::.|.|.||
plant   236 ----RMPMQGP-------------HHHYSTFPADSLALTLHVSIQEPSSSSSLSLPSSS 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 Myb_DNA-bind_6 88..147 CDD:372817 4/10 (40%)
PLN03212 136..>236 CDD:178751 47/99 (47%)
Cmyb_C 388..>484 CDD:462753
MYB110NP_001078220.1 PLN03212 67..>171 CDD:178751 49/103 (48%)
Blue background indicates that the domain is not in the aligned region.

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