DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Myb and MYB30

DIOPT Version :9

Sequence 1:	NP_511170.1	Gene:	Myb / 32543	FlyBaseID:	FBgn0002914	Length:	657	Species:	Drosophila melanogaster
Sequence 2:	NP_189533.1	Gene:	MYB30 / 822525	AraportID:	AT3G28910	Length:	323	Species:	Arabidopsis thaliana

Alignment Length:	293	Identity:	78/293 - (26%)
Similarity:	122/293 - (41%)	Gaps:	70/293 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly   136 KGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNG--RIGKQCRERWHNHLNPNIKKTAWTEKEDEI 198
            |||||.:||.:::..::..||..|..:... .|  |..|.||.||.|:|.|.||:..:||.|:::
plant    14 KGPWTPEEDIILVTYIQEHGPGNWRAVPTN-TGLLRCSKSCRLRWTNYLRPGIKRGNFTEHEEKM 77

  Fly   199 IYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRK---------YDVERRSVNASGSDLKSS 254
            |......|||:||.||..||.||||.|||:||:.:::|         .:::|.|:::|.|
plant    78 IVHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLNKVNQDSHQELDRSSLSSSPS----- 137

  Fly   255 RTHLITLIKSGGISKCMNNMQHNKESGGEAVNKSENADGASVTAVKGGDLAQESQDDHQKGSNLA 319
                                       ..:.|.:.|        :..|...:..|.|       .
plant   138 ---------------------------SSSANSNSN--------ISRGQWERRLQTD-------I 160

  Fly   320 HLSMQHLIKLTMPRQTPIILKRTRKHIPETHHQAGCSSSETFNQEEAAGNARSRPPSSPVISPIK 384
            ||:.:.|.:...|...||        |..|......|:....:...|:|..|::..|:...|..:
plant   161 HLAKKALSEALSPAVAPI--------ITSTVTTTSSSAESRRSTSSASGFLRTQETSTTYASSTE 217

  Fly   385 SLPFSPSHFLK-SPCLTTFEDMDLRASTPVTKV 416
            ::......::| ||  .|....|..|||.|.:|
plant   218 NIAKLLKGWVKNSP--KTQNSADQIASTEVKEV 248

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Myb	NP_511170.1	SANT	85..132	CDD:197842
		Myb_DNA-bind_6	88..147	CDD:290632	7/10 (70%)
		SANT	136..184	CDD:197842	19/49 (39%)
		Myb_DNA-bind_6	139..197	CDD:290632	22/59 (37%)
		SANT	188..235	CDD:197842	22/46 (48%)
		Myb_DNA-binding	188..233	CDD:278669	22/44 (50%)
		Cmyb_C	388..530	CDD:286408	10/30 (33%)
MYB30	NP_189533.1	PLN03212	5..>128	CDD:178751	45/114 (39%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5147
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810