DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and TDF1

DIOPT Version :10

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_189488.1 Gene:TDF1 / 822477 AraportID:AT3G28470 Length:317 Species:Arabidopsis thaliana


Alignment Length:369 Identity:89/369 - (24%)
Similarity:146/369 - (39%) Gaps:108/369 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 KGPWTRDEDDMVIKLVRNFGPKKWTLIARY--LNGRIGKQCRERWHNHLNPNIKKTAWTEKEDEI 198
            ||.||.:||..::..|...|...|:||.:.  || |.||.||.||.|:|.|::|..:::.:|:|:
plant    14 KGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLN-RCGKSCRLRWTNYLRPDLKHDSFSTQEEEL 77

  Fly   199 IYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYD----------------VERRSVNAS 247
            |.:.|..:|::|:.||::|||||||.:|||||:.:::|..                .|.|:::..
plant    78 IIECHRAIGSRWSSIARKLPGRTDNDVKNHWNTKLKKKLMKMGIDPVTHKPVSQLLAEFRNISGH 142

  Fly   248 G-SDLKSSRTHLITLIKSGGISKCMNNMQHNKESGGEAVNKSENADGASVTAVKGGDLAQESQDD 311
            | :..|:..::...|.:|....:.|.|...|.||                 ......:...:..:
plant   143 GNASFKTEPSNNSILTQSNSAWEMMRNTTTNHES-----------------YYTNSPMMFTNSSE 190

  Fly   312 HQKGSNLAHLSMQHLIKLTMPRQTPIILKRTRKHIPETHHQAGCSSSETFNQEEAAGNARSRPPS 376
            :|......:....||:..|                     .:.||||.                |
plant   191 YQTTPFHFYSHPNHLLNGT---------------------TSSCSSSS----------------S 218

  Fly   377 SPVISPIKSLPFSPSHFLKSPCLTTFEDMDLRASTPVTKVYNRVGMEIKKEMETS------SIET 435
            |..|:....:|.:|        :|.|...|...|.||.:|   ||.....::..:      :||.
plant   219 STSITQPNQVPQTP--------VTNFYWSDFLLSDPVPQV---VGSSATSDLTFTQNEHHFNIEA 272

  Fly   436 PHKSQLGPRTPTPFKKALAAIGKKRDGRRYEPSSPSSLVEDLAE 479
            .:.||              .|..|..|..:   |.||.|:::.:
plant   273 EYISQ--------------NIDSKASGTCH---SASSFVDEILD 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 Myb_DNA-bind_6 88..147 CDD:372817 6/10 (60%)
PLN03212 136..>236 CDD:178751 44/101 (44%)
Cmyb_C 388..>484 CDD:462753 21/98 (21%)
TDF1NP_189488.1 PLN03091 1..>131 CDD:215570 45/117 (38%)

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