DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myb and MYB57

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_186802.1 Gene:MYB57 / 821113 AraportID:AT3G01530 Length:206 Species:Arabidopsis thaliana


Alignment Length:198 Identity:66/198 - (33%)
Similarity:104/198 - (52%) Gaps:31/198 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 KGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNG--RIGKQCRERWHNHLNPNIKKTAWTEKEDEI 198
            |||||.:||.::...:.|.|...|..:|: .:|  |.||.||.||.|:|.|::::...||:|..:
plant    27 KGPWTMEEDFILFNYILNHGEGLWNSVAK-ASGLKRTGKSCRLRWLNYLRPDVRRGNITEEEQLL 90

  Fly   199 IYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSVNASGSDLKSSRTHLITLIK 263
            |.|.|.:|||:|:||||.|||||||.|||.|.:.::|...|       |..::.:.:.|      
plant    91 IIQLHAKLGNRWSKIAKHLPGRTDNEIKNFWRTKIQRHMKV-------SSENMMNHQHH------ 142

  Fly   264 SGGISKCMNNMQHN----KESGGEAVNKSENADGASVTAVKGGDLAQESQDDHQKGSNLAHLSMQ 324
                  |..|.|.:    :.|.|:|::.:|:...|..|..  ..:.|:|.:::.   |:..|...
plant   143 ------CSGNSQSSGMTTQGSSGKAIDTAESFSQAKTTTF--NVVEQQSNENYW---NVEDLWPV 196

  Fly   325 HLI 327
            ||:
plant   197 HLL 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842
Myb_DNA-bind_6 88..147 CDD:290632 7/10 (70%)
SANT 136..184 CDD:197842 21/49 (43%)
Myb_DNA-bind_6 139..197 CDD:290632 22/59 (37%)
SANT 188..235 CDD:197842 25/46 (54%)
Myb_DNA-binding 188..233 CDD:278669 25/44 (57%)
Cmyb_C 388..530 CDD:286408
MYB57NP_186802.1 SANT 27..76 CDD:197842 21/49 (43%)
Myb_DNA-binding 27..74 CDD:278669 20/47 (43%)
SANT 80..127 CDD:197842 25/46 (54%)
Myb_DNA-binding 80..123 CDD:278669 25/42 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.