DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB5

DIOPT Version :10

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_187963.1 Gene:MYB5 / 820556 AraportID:AT3G13540 Length:249 Species:Arabidopsis thaliana


Alignment Length:178 Identity:63/178 - (35%)
Similarity:98/178 - (55%) Gaps:35/178 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 KGPWTRDEDDMVIKLVRNFGPKKW-TLIARYLNGRIGKQCRERWHNHLNPNIKKTAWTEKEDEII 199
            :||||.:||::::..::..|..:| :|..|....|.||.||.||.|:|.|::|:...|..|:::|
plant    25 RGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYLRPSVKRGGITSDEEDLI 89

  Fly   200 YQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSVNASGSDLKSSRTHLITLIKS 264
            .:.|..|||:|:.||.|:||||||.|||:||:.:|:|  :.|:.::        .:||       
plant    90 LRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKK--LLRQGID--------PQTH------- 137

  Fly   265 GGISKCM--NNMQHNKE--SGG-----EAVNKSENADGASVTAVKGGD 303
                |.:  ||:...:|  |||     |.::.|...|    |.|.|||
plant   138 ----KPLDANNIHKPEEEVSGGQKYPLEPISSSHTDD----TTVNGGD 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 Myb_DNA-bind_6 88..147 CDD:372817 6/10 (60%)
PLN03212 136..>236 CDD:178751 44/100 (44%)
Cmyb_C 388..>484 CDD:462753
MYB5NP_187963.1 PLN03212 1..249 CDD:178751 63/178 (35%)
Blue background indicates that the domain is not in the aligned region.

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