DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB67

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_566434.1 Gene:MYB67 / 820454 AraportID:AT3G12720 Length:307 Species:Arabidopsis thaliana


Alignment Length:297 Identity:80/297 - (26%)
Similarity:133/297 - (44%) Gaps:53/297 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 KGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNG--RIGKQCRERWHNHLNPNIKKTAWTEKEDEI 198
            :|.|:.:||:.:::.:...|...|:.:.: |.|  |.||.||.||.|:|.|::::.::.|:|::|
plant    24 RGLWSPEEDEKLLRYITTHGHPSWSSVPK-LAGLQRCGKSCRLRWINYLRPDLRRGSFNEEEEQI 87

  Fly   199 IYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSVNASGSDLKSSRTHLITLIK 263
            |...|..|||:||:|||.|||||||.:||.|||.:::|       :.:.|.|   ..||  .|:.
plant    88 IIDVHRILGNKWAQIAKHLPGRTDNEVKNFWNSCIKKK-------LLSQGLD---PSTH--NLMP 140

  Fly   264 SGGISKCMNNMQHNKESGGEAVNKSENADGASVTA--VKGGDLAQESQDDHQKGSNLAHLSMQHL 326
            |...|...||....|.:...::.|:......|.||  :...:....::.:..|..|         
plant   141 SHKRSSSSNNNNIPKPNKTTSIMKNPTDLDQSTTAFSITNINPPTSTKPNKLKSPN--------- 196

  Fly   327 IKLTMPRQTPI----ILKRTRKHIPETHHQAGCSSSETF--NQEEAAGNARSRPPSSPVISPIKS 385
             :.|:|.||.|    .:..|:..||.....:.....|..  :..:..|.|            |..
plant   197 -QTTIPSQTVIPINDNMSSTQTMIPINDPMSSLLDDENMIPHWSDVDGMA------------IHE 248

  Fly   386 LPFSPSHFLKSPCLTTFED----MDLRASTPVTKVYN 418
            .|..||    ...:...:|    ||:..:||.:..::
plant   249 APMLPS----DKAVVGVDDDDLNMDILFNTPSSSAFD 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842
Myb_DNA-bind_6 88..147 CDD:290632 4/10 (40%)
SANT 136..184 CDD:197842 17/49 (35%)
Myb_DNA-bind_6 139..197 CDD:290632 19/59 (32%)
SANT 188..235 CDD:197842 25/46 (54%)
Myb_DNA-binding 188..233 CDD:278669 25/44 (57%)
Cmyb_C 388..530 CDD:286408 7/35 (20%)
MYB67NP_566434.1 PLN03091 12..>220 CDD:215570 66/218 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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